RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 LHX8Q68G74 356 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.61■□□□□ 0.25
LAMA4-208ENST00000431543 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 FGD4Q96M96 766 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 ACAD9Q9H845 621 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 A1CFQ9NQ94 594 aaKnown RBP16.61■□□□□ 0.25
LAMA4-208ENST00000431543 FBXO40Q9UH90 709 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
LAMA4-208ENST00000431543 RBM19Q9Y4C8 960 aaKnown RBP16.61■□□□□ 0.25
LAMA4-208ENST00000431543 CYBAP13498 195 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 SLC35G1Q2M3R5 365 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 ASPRV1Q53RT3 343 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 UBE2Q1Q7Z7E8 422 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 PURBQ96QR8 312 aaKnown RBP16.6■□□□□ 0.25
LAMA4-208ENST00000431543 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 DAXXQ9UER7 740 aaPredicted RBP16.6■□□□□ 0.25
LAMA4-208ENST00000431543 DIS3Q9Y2L1 958 aaKnown RBP16.6■□□□□ 0.25
LAMA4-208ENST00000431543 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
LAMA4-208ENST00000431543 PALM3A6NDB9 673 aaPredicted RBP16.59■□□□□ 0.25
LAMA4-208ENST00000431543 KLRF2D3W0D1 207 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 NFIBO00712 420 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 CPA1P15085 419 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 TROAPQ12815 778 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 Q6ZUG5 572 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 FBXL16Q8N461 479 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 CLEC4DQ8WXI8 215 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 JMJD4Q9H9V9 463 aa16.59■□□□□ 0.25
LAMA4-208ENST00000431543 DDX49Q9Y6V7 483 aaKnown RBP16.59■□□□□ 0.25
LAMA4-208ENST00000431543 SOWAHBA6NEL2 793 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 SH2B2O14492 632 aaPredicted RBP16.58■□□□□ 0.24
LAMA4-208ENST00000431543 LIFRP42702 1097 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
LAMA4-208ENST00000431543 GRM4Q14833 912 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
LAMA4-208ENST00000431543 USH1GQ495M9 461 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 ANO1Q5XXA6 986 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 FAM133AQ8N9E0 248 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 DIS3LQ8TF46 1054 aaKnown RBP16.58■□□□□ 0.24
LAMA4-208ENST00000431543 SNX21Q969T3 373 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
LAMA4-208ENST00000431543 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 CYP39A1Q9NYL5 469 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 OGDHLQ9ULD0 1010 aa16.58■□□□□ 0.24
LAMA4-208ENST00000431543 ASTN1O14525 1302 aa16.57■□□□□ 0.24
LAMA4-208ENST00000431543 POTEB2H3BUK9 544 aa16.57■□□□□ 0.24
LAMA4-208ENST00000431543 DHX16O60231 1041 aaKnown RBP16.57■□□□□ 0.24
LAMA4-208ENST00000431543 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
LAMA4-208ENST00000431543 SNAI1O95863 264 aaPredicted RBP16.57■□□□□ 0.24
LAMA4-208ENST00000431543 QRICH1Q2TAL8 776 aa16.57■□□□□ 0.24
LAMA4-208ENST00000431543 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
LAMA4-208ENST00000431543 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
LAMA4-208ENST00000431543 DDX20Q9UHI6 824 aaKnown RBP16.57■□□□□ 0.24
LAMA4-208ENST00000431543 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
LAMA4-208ENST00000431543 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
LAMA4-208ENST00000431543 AK2P54819 239 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
LAMA4-208ENST00000431543 MAMDC4Q6UXC1 1216 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 ZNF654Q8IZM8 581 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 NUP133Q8WUM0 1156 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 TBC1D5Q92609 795 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 BRF1Q92994 677 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
LAMA4-208ENST00000431543 SLC12A7Q9Y666 1083 aa16.56■□□□□ 0.24
LAMA4-208ENST00000431543 CYTH3O43739 400 aa16.55■□□□□ 0.24
LAMA4-208ENST00000431543 PPP1R11O60927 126 aaPredicted RBP16.55■□□□□ 0.24
LAMA4-208ENST00000431543 RXRAP19793 462 aa16.55■□□□□ 0.24
LAMA4-208ENST00000431543 SLC30A10Q6XR72 485 aa16.55■□□□□ 0.24
LAMA4-208ENST00000431543 ZNF467Q7Z7K2 595 aaPredicted RBP16.55■□□□□ 0.24
LAMA4-208ENST00000431543 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
LAMA4-208ENST00000431543 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
LAMA4-208ENST00000431543 PFASO15067 1338 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 SEPT4O43236 478 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 CALM1P0DP23 149 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 CALM2P0DP24 149 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 CALM3P0DP25 149 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 ARMCX2Q7L311 632 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
LAMA4-208ENST00000431543 PIGSQ96S52 555 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
LAMA4-208ENST00000431543 SH2B1Q9NRF2 756 aaPredicted RBP16.54■□□□□ 0.24
LAMA4-208ENST00000431543 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.54■□□□□ 0.24
LAMA4-208ENST00000431543 BAZ2BQ9UIF8 2168 aaKnown RBP16.54■□□□□ 0.24
LAMA4-208ENST00000431543 MCM3APO60318 1980 aa16.53■□□□□ 0.24
LAMA4-208ENST00000431543 SYNGAP1Q96PV0 1343 aa16.53■□□□□ 0.24
LAMA4-208ENST00000431543 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
LAMA4-208ENST00000431543 CALML3P27482 149 aa16.53■□□□□ 0.24
LAMA4-208ENST00000431543 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
LAMA4-208ENST00000431543 FBXO11Q86XK2 927 aa16.53■□□□□ 0.24
LAMA4-208ENST00000431543 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms