RNA–Protein interactions for RNA: ENST00000428947.1

AP001187.1-201, humanhuman

BASIC

Gene AP001187.1, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001187.1-201ENST00000428947 RNF208Q9H0X6 261 aa13□□□□□ -0.33
AP001187.1-201ENST00000428947 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
AP001187.1-201ENST00000428947 HOMER2Q9NSB8 354 aa13□□□□□ -0.33
AP001187.1-201ENST00000428947 BIN2Q9UBW5 565 aaPredicted RBP13□□□□□ -0.33
AP001187.1-201ENST00000428947 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
AP001187.1-201ENST00000428947 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 ZBTB5O15062 677 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 CALM1P0DP23 149 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 CALM2P0DP24 149 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 CALM3P0DP25 149 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 CYBAP13498 195 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 RXRAP19793 462 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 PSMA5P28066 241 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 CCND3P30281 292 aaPredicted RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 BAATQ14032 418 aaPredicted RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 PRAMEF19Q5SWL8 479 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 MFSD14CQ5VZR4 134 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 Q6ZUG5 572 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 ANKRD35Q8N283 1001 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 MORC4Q8TE76 937 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 PIGSQ96S52 555 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 TINF2Q9BSI4 451 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 KATNBL1Q9H079 304 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 SLC5A4Q9NY91 659 aa12.99□□□□□ -0.33
AP001187.1-201ENST00000428947 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 ZNF865P0CJ78 1059 aaPredicted RBP12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 RCAN1P53805 252 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 ANAPC15P60006 121 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 NFXL1Q6ZNB6 911 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 FBXO11Q86XK2 927 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 RAB11FIP4Q86YS3 637 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 LZTS2Q9BRK4 669 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 ALDH8A1Q9H2A2 487 aaPredicted RBP12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 NRBP1Q9UHY1 535 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
AP001187.1-201ENST00000428947 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 CDC27P30260 824 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 KIF5BP33176 963 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 GNAQP50148 359 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 BRF1Q92994 677 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 DEFB118Q96PH6 123 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 AMNQ9BXJ7 453 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
AP001187.1-201ENST00000428947 MYH8P13535 1937 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 PFASO15067 1338 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 ABCB11O95342 1321 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 SYNGAP1Q96PV0 1343 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 KLF18A0A0U1RQI7 1052 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 ZBTB43O43298 467 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 CAPN2P17655 700 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 PDIA3P30101 505 aaKnown RBP12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 NSMFQ6X4W1 530 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 CCDC144CPQ8IYA2 1237 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 KIF2CQ99661 725 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 COL20A1Q9P218 1284 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 DDX49Q9Y6V7 483 aaKnown RBP12.96□□□□□ -0.33
AP001187.1-201ENST00000428947 DOCK3Q8IZD9 2030 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 EDNRBP24530 442 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 HSD17B4P51659 736 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 PPP2R5BQ15173 497 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 NTRK3Q16288 839 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 USH1GQ495M9 461 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 SLC30A10Q6XR72 485 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 SYNE3Q6ZMZ3 975 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 DDX20Q9UHI6 824 aaKnown RBP12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 PARP14Q460N5 1801 aa12.95□□□□□ -0.34
AP001187.1-201ENST00000428947 NID2Q14112 1375 aa12.94□□□□□ -0.34
AP001187.1-201ENST00000428947 LOC102724159A0A0B4J2E5 919 aa12.94□□□□□ -0.34
AP001187.1-201ENST00000428947 SEPT4O43236 478 aa12.94□□□□□ -0.34
AP001187.1-201ENST00000428947 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms