RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
TSPO-204ENST00000428336 GPATCH4Q5T3I0 446 aaKnown RBP18.09■□□□□ 0.49
TSPO-204ENST00000428336 CCSAPQ6IQ19 270 aaPredicted RBP18.09■□□□□ 0.49
TSPO-204ENST00000428336 NSMFQ6X4W1 530 aa18.09■□□□□ 0.49
TSPO-204ENST00000428336 PNMA1Q8ND90 353 aa18.09■□□□□ 0.49
TSPO-204ENST00000428336 RUFY2Q8WXA3 655 aa18.09■□□□□ 0.49
TSPO-204ENST00000428336 TSEN34Q9BSV6 310 aaKnown RBP18.09■□□□□ 0.49
TSPO-204ENST00000428336 A0A1W2PQ45 241 aaPredicted RBP18.08■□□□□ 0.48
TSPO-204ENST00000428336 A0A1W2PQY0 241 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 ASB14A6NK59 587 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 NFIBO00712 420 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 IRX5P78411 483 aaPredicted RBP18.08■□□□□ 0.48
TSPO-204ENST00000428336 BAATQ14032 418 aaPredicted RBP18.08■□□□□ 0.48
TSPO-204ENST00000428336 CLEC4DQ8WXI8 215 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 UBE2OQ9C0C9 1292 aaKnown RBP18.08■□□□□ 0.48
TSPO-204ENST00000428336 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 CPVLQ9H3G5 476 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 KAT14Q9H8E8 782 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 CNNM2Q9H8M5 875 aa18.08■□□□□ 0.48
TSPO-204ENST00000428336 TNKSO95271 1327 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 WDR19Q8NEZ3 1342 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 SGSM2O43147 1006 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 CST5P28325 142 aaPredicted RBP18.07■□□□□ 0.48
TSPO-204ENST00000428336 ACLYP53396 1101 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 KCNA10Q16322 511 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 CYB5R4Q7L1T6 521 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 TDHQ8IZJ6 230 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 MORC4Q8TE76 937 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 UPF3AQ9H1J1 476 aaKnown RBP18.07■□□□□ 0.48
TSPO-204ENST00000428336 PNMA2Q9UL42 364 aa18.07■□□□□ 0.48
TSPO-204ENST00000428336 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.06■□□□□ 0.48
TSPO-204ENST00000428336 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 CTAGE5O15320 804 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 CYP21A2P08686 494 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 GJA9P57773 515 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 NKX3-2P78367 333 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 TLE2Q04725 743 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 SEC23AQ15436 765 aa18.06■□□□□ 0.48
TSPO-204ENST00000428336 C6orf222P0C671 652 aaPredicted RBP18.05■□□□□ 0.48
TSPO-204ENST00000428336 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 TAPT1Q6NXT6 567 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 SH3RF1Q7Z6J0 888 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 LRCH3Q96II8 777 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 LBHD1Q9BQE6 289 aaPredicted RBP18.05■□□□□ 0.48
TSPO-204ENST00000428336 UBAC1Q9BSL1 405 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 PDGFCQ9NRA1 345 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 PRKAG2Q9UGJ0 569 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 GNEQ9Y223 722 aaKnown RBP18.05■□□□□ 0.48
TSPO-204ENST00000428336 TAF6LQ9Y6J9 622 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 DNAH12Q6ZR08 3092 aa18.05■□□□□ 0.48
TSPO-204ENST00000428336 PTPDC1A2A3K4 754 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 TRIM43BA6NCK2 446 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 TNFAIP2Q03169 654 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 LRIT3Q3SXY7 679 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 SLC30A10Q6XR72 485 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 RNF207Q6ZRF8 634 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 EEPD1Q7L9B9 569 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 PCSK9Q8NBP7 692 aaKnown RBP18.04■□□□□ 0.48
TSPO-204ENST00000428336 NUP133Q8WUM0 1156 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 TRIM43Q96BQ3 446 aaPredicted RBP18.04■□□□□ 0.48
TSPO-204ENST00000428336 SPC25Q9HBM1 224 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 PRDM5Q9NQX1 630 aaPredicted RBP18.04■□□□□ 0.48
TSPO-204ENST00000428336 STARD7Q9NQZ5 370 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 ADD3Q9UEY8 706 aaKnown RBP18.04■□□□□ 0.48
TSPO-204ENST00000428336 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
TSPO-204ENST00000428336 LAMA4Q16363 1823 aa18.04■□□□□ 0.48
TSPO-204ENST00000428336 LAMA3Q16787 3333 aa18.03■□□□□ 0.48
TSPO-204ENST00000428336 ASGR1P07306 291 aa18.03■□□□□ 0.48
TSPO-204ENST00000428336 PARP1P09874 1014 aaKnown RBP18.03■□□□□ 0.48
TSPO-204ENST00000428336 SMPD1P17405 629 aa18.03■□□□□ 0.48
TSPO-204ENST00000428336 CALML3P27482 149 aa18.03■□□□□ 0.48
TSPO-204ENST00000428336 ALDH5A1P51649 535 aaPredicted RBP18.03■□□□□ 0.48
TSPO-204ENST00000428336 RPS6P62753 249 aaKnown RBP18.03■□□□□ 0.48
TSPO-204ENST00000428336 CDC37Q16543 378 aaPredicted RBP18.03■□□□□ 0.48
TSPO-204ENST00000428336 GNASQ5JWF2 1037 aa18.03■□□□□ 0.48
TSPO-204ENST00000428336 IFIT1BQ5T764 474 aaKnown RBP18.03■□□□□ 0.48
TSPO-204ENST00000428336 FBXO16Q8IX29 292 aaPredicted RBP18.03■□□□□ 0.48
TSPO-204ENST00000428336 VTA1Q9NP79 307 aa18.03■□□□□ 0.48
TSPO-204ENST00000428336 ELP1O95163 1332 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 LOC102724159A0A0B4J2E5 919 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 PQBP1O60828 265 aaKnown RBP18.02■□□□□ 0.48
TSPO-204ENST00000428336 PTGS1P23219 599 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 ITGB8P26012 769 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 PWP2Q15269 919 aaKnown RBP18.02■□□□□ 0.48
TSPO-204ENST00000428336 USH1GQ495M9 461 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 TMEM63BQ5T3F8 832 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 IQSEC1Q6DN90 963 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 NOL8Q76FK4 1167 aaKnown RBP18.02■□□□□ 0.48
TSPO-204ENST00000428336 ANKRD33Q7Z3H0 272 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 RGS22Q8NE09 1264 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 MAP4K1Q92918 833 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
TSPO-204ENST00000428336 SZT2Q5T011 3432 aa18.02■□□□□ 0.47
TSPO-204ENST00000428336 E7EWF7 191 aa18.01■□□□□ 0.47
TSPO-204ENST00000428336 CLTBP09497 229 aa18.01■□□□□ 0.47
TSPO-204ENST00000428336 CDK7P50613 346 aa18.01■□□□□ 0.47
TSPO-204ENST00000428336 BEX3Q00994 111 aa18.01■□□□□ 0.47
TSPO-204ENST00000428336 TRDNQ13061 729 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms