RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
KDM3A-204ENST00000427678 BRF1Q92994 677 aa17.31■□□□□ 0.36
KDM3A-204ENST00000427678 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
KDM3A-204ENST00000427678 UNC93B1Q9H1C4 597 aa17.31■□□□□ 0.36
KDM3A-204ENST00000427678 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
KDM3A-204ENST00000427678 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
KDM3A-204ENST00000427678 MGAMO43451 1857 aa17.31■□□□□ 0.36
KDM3A-204ENST00000427678 ABCB11O95342 1321 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 CYTH3O43739 400 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 GJB1P08034 283 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 CYP2C19P33261 490 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 RCAN1P53805 252 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 SOX10P56693 466 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 CACNB2Q08289 660 aaPredicted RBP17.3■□□□□ 0.36
KDM3A-204ENST00000427678 TRIM32Q13049 653 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 HOMER1Q86YM7 354 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 RAB11FIP4Q86YS3 637 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 MSL3Q8N5Y2 521 aaKnown RBP17.3■□□□□ 0.36
KDM3A-204ENST00000427678 RGS22Q8NE09 1264 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 CLEC4DQ8WXI8 215 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
KDM3A-204ENST00000427678 PIGSQ96S52 555 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 SPZ1Q9BXG8 430 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 MAF1Q9H063 256 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 RBM28Q9NW13 759 aaKnown RBP17.3■□□□□ 0.36
KDM3A-204ENST00000427678 CYP39A1Q9NYL5 469 aa17.3■□□□□ 0.36
KDM3A-204ENST00000427678 MRPL11Q9Y3B7 192 aaKnown RBP17.3■□□□□ 0.36
KDM3A-204ENST00000427678 CCDC196A0A1B0GTZ2 297 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 IGHA2P01877 340 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 APOBRQ0VD83 1088 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 BAATQ14032 418 aaPredicted RBP17.29■□□□□ 0.36
KDM3A-204ENST00000427678 RTN1Q16799 776 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 ZNF467Q7Z7K2 595 aaPredicted RBP17.29■□□□□ 0.36
KDM3A-204ENST00000427678 MCF2L2Q86YR7 1114 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 SRBD1Q8N5C6 995 aaKnown RBP17.29■□□□□ 0.36
KDM3A-204ENST00000427678 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 AGXT2Q9BYV1 514 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 UPF3BQ9BZI7 483 aaKnown RBP17.29■□□□□ 0.36
KDM3A-204ENST00000427678 PDRG1Q9NUG6 133 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
KDM3A-204ENST00000427678 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 NFIBO00712 420 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
KDM3A-204ENST00000427678 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 MAMDC4Q6UXC1 1216 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 RNF207Q6ZRF8 634 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 CMTR1Q8N1G2 835 aaKnown RBP17.28■□□□□ 0.36
KDM3A-204ENST00000427678 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.28■□□□□ 0.36
KDM3A-204ENST00000427678 PAK6Q9NQU5 681 aaPredicted RBP17.28■□□□□ 0.36
KDM3A-204ENST00000427678 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
KDM3A-204ENST00000427678 NRBP1Q9UHY1 535 aa17.28■□□□□ 0.36
KDM3A-204ENST00000427678 POTEFA5A3E0 1075 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 GOLGA8AA7E2F4 631 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 GOLGA8BA8MQT2 603 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 CAPN2P17655 700 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 METAP2P50579 478 aaKnown RBP eCLIP17.27■□□□□ 0.36
KDM3A-204ENST00000427678 EVCP57679 992 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 CCDC82Q8N4S0 544 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 IL17RAQ96F46 866 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 DEFB118Q96PH6 123 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 CNPY2Q9Y2B0 182 aa17.27■□□□□ 0.36
KDM3A-204ENST00000427678 ASB14A6NK59 587 aa17.26■□□□□ 0.35
KDM3A-204ENST00000427678 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
KDM3A-204ENST00000427678 SGPL1O95470 568 aa17.26■□□□□ 0.35
KDM3A-204ENST00000427678 TFRCP02786 760 aaKnown RBP17.26■□□□□ 0.35
KDM3A-204ENST00000427678 CALML3P27482 149 aa17.26■□□□□ 0.35
KDM3A-204ENST00000427678 CNGA1P29973 690 aa17.26■□□□□ 0.35
KDM3A-204ENST00000427678 GJA8P48165 433 aa17.26■□□□□ 0.35
KDM3A-204ENST00000427678 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
KDM3A-204ENST00000427678 U2AF1L4Q8WU68 220 aaKnown RBP17.26■□□□□ 0.35
KDM3A-204ENST00000427678 ADD3Q9UEY8 706 aaKnown RBP17.26■□□□□ 0.35
KDM3A-204ENST00000427678 KIAA0100Q14667 2235 aaKnown RBP17.26■□□□□ 0.35
KDM3A-204ENST00000427678 SYNGAP1Q96PV0 1343 aa17.25■□□□□ 0.35
KDM3A-204ENST00000427678 SOWAHBA6NEL2 793 aa17.25■□□□□ 0.35
KDM3A-204ENST00000427678 EN2P19622 333 aaPredicted RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 PDIA3P30101 505 aaKnown RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 TOB2Q14106 344 aaPredicted RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 PRAMEF19Q5SWL8 479 aa17.25■□□□□ 0.35
KDM3A-204ENST00000427678 SAMD3Q8N6K7 520 aa17.25■□□□□ 0.35
KDM3A-204ENST00000427678 ALDH8A1Q9H2A2 487 aaPredicted RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 MAP3K20Q9NYL2 800 aaKnown RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 COL11A1P12107 1806 aaPredicted RBP17.25■□□□□ 0.35
KDM3A-204ENST00000427678 B4DLN1 442 aa17.24■□□□□ 0.35
KDM3A-204ENST00000427678 MSCO60682 206 aa17.24■□□□□ 0.35
KDM3A-204ENST00000427678 SNAI1O95863 264 aaPredicted RBP17.24■□□□□ 0.35
KDM3A-204ENST00000427678 CYBAP13498 195 aa17.24■□□□□ 0.35
KDM3A-204ENST00000427678 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
KDM3A-204ENST00000427678 MRPL12P52815 198 aaKnown RBP17.24■□□□□ 0.35
KDM3A-204ENST00000427678 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
KDM3A-204ENST00000427678 TBC1D5Q92609 795 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms