RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 SLC30A10Q6XR72 485 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SLC39A5Q6ZMH5 540 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ANKRD35Q8N283 1001 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 DDX11Q96FC9 970 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ZSCAN10Q96SZ4 725 aaPredicted RBP18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CDH23Q9H251 3354 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 A0A1W2PPC1 479 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 GOLGA8HP0CJ92 632 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CST5P28325 142 aaPredicted RBP18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ANTXR2P58335 489 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 ACVR2BQ13705 512 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 IMMTQ16891 758 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 PNMA1Q8ND90 353 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
HLA-DQB2-230ENST00000427449 A0A1W2PQ45 241 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 A0A1W2PQY0 241 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 RARBP10826 455 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CCDC144BQ3MJ40 725 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TAPT1Q6NXT6 567 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ARRDC4Q8NCT1 418 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ABHD16BQ9H3Z7 469 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 PDLIM7Q9NR12 457 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 GNEQ9Y223 722 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 EYSQ5T1H1 3165 aa18.76■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TANC1Q9C0D5 1861 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 POTEB2H3BUK9 544 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 OPLAHO14841 1288 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 DUSP11O75319 330 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ITGB8P26012 769 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 IKQ13123 557 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TRIM60Q495X7 471 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CNPY2Q9Y2B0 182 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 DOCK5Q9H7D0 1870 aa18.75■□□□□ 0.59
HLA-DQB2-230ENST00000427449 GBF1Q92538 1859 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 KBTBD13C9JR72 458 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 EDNRBP24530 442 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 GJA9P57773 515 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 GPATCH4Q5T3I0 446 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 STAG2Q8N3U4 1231 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 FERMT2Q96AC1 680 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 UBA5Q9GZZ9 404 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ISY1Q9ULR0 285 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB2-230ENST00000427449 MYH7BA7E2Y1 1941 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TRIM43BA6NCK2 446 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ALDH5A1P51649 535 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 BAATQ14032 418 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 MB21D2Q8IYB1 491 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TRIM43Q96BQ3 446 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 KRT23Q9C075 422 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CNNM2Q9H8M5 875 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 COL20A1Q9P218 1284 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 MAD2L2Q9UI95 211 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 FAM184BQ9ULE4 1060 aa18.73■□□□□ 0.59
HLA-DQB2-230ENST00000427449 E7EWF7 191 aa18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ACLYP53396 1101 aa18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 IQCA1Q86XH1 822 aa18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 FBXO16Q8IX29 292 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ADGRF4Q8IZF3 695 aa18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 LRCH3Q96II8 777 aa18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TSEN34Q9BSV6 310 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 JMJD4Q9H9V9 463 aa18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CTDP1Q9Y5B0 961 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB2-230ENST00000427449 SMPD1P17405 629 aa18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 GHRHRQ02643 423 aa18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CDC37Q16543 378 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 ASPRV1Q53RT3 343 aa18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 NSMFQ6X4W1 530 aa18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 TBC1D5Q92609 795 aa18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 RBM8AQ9Y5S9 174 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB2-230ENST00000427449 CHD9Q3L8U1 2897 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 PALM3A6NDB9 673 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 CYTH3O43739 400 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 CDK7P50613 346 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RPS6P62753 249 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TROAPQ12815 778 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 SCN5AQ14524 2016 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 KCNA10Q16322 511 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 QRICH1Q2TAL8 776 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ANKRD33Q7Z3H0 272 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RNF180Q86T96 592 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ESYT1Q9BSJ8 1104 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 KAT14Q9H8E8 782 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 GPHNQ9NQX3 736 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 U3KPZ7 1027 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB2-230ENST00000427449 GRIN2DO15399 1336 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms