RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 MYL5Q02045 173 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 CERKLQ49MI3 558 aaPredicted RBP17.81■□□□□ 0.44
PKP4-205ENST00000426248 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
PKP4-205ENST00000426248 SWT1Q5T5J6 900 aaKnown RBP17.81■□□□□ 0.44
PKP4-205ENST00000426248 ATRIPQ8WXE1 791 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 POLD4Q9HCU8 107 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 RBM28Q9NW13 759 aaKnown RBP17.81■□□□□ 0.44
PKP4-205ENST00000426248 FMNL3Q8IVF7 1028 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 KAT2BQ92831 832 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
PKP4-205ENST00000426248 CPSF2Q9P2I0 782 aaKnown RBP17.81■□□□□ 0.44
PKP4-205ENST00000426248 FLT1P17948 1338 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 RBM43Q6ZSC3 357 aaKnown RBP17.8■□□□□ 0.44
PKP4-205ENST00000426248 CCDC114Q96M63 670 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 SPON1Q9HCB6 807 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 BTBD18B2RXH4 712 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 MATR3P43243 847 aaKnown RBP eCLIP17.8■□□□□ 0.441e-6■■■■□ 23.3
PKP4-205ENST00000426248 ST3GAL1Q11201 340 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 GPR162Q16538 588 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.44
PKP4-205ENST00000426248 EP400Q96L91 3159 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 CUTAO60888 179 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 ATP1A2P50993 1020 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 MAP2K1Q02750 393 aaPredicted RBP17.8■□□□□ 0.44
PKP4-205ENST00000426248 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
PKP4-205ENST00000426248 GPR75-ASB3A0A0A6YYF3 556 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 PPP1R12AO14974 1030 aaPredicted RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 PLEKHA8P1O95397 391 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 NFIAQ12857 509 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 USP17L2Q6R6M4 530 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 TRIM6Q9C030 488 aaPredicted RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 CDC23Q9UJX2 597 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 PSMD14O00487 310 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 SKAP2O75563 359 aaPredicted RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 SSR1P43307 286 aaKnown RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 RESTQ13127 1097 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 GPKOWQ92917 476 aaPredicted RBP eCLIP17.79■□□□□ 0.44
PKP4-205ENST00000426248 CLIC6Q96NY7 704 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 KLRF2D3W0D1 207 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 GSPT2Q8IYD1 628 aaKnown RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 RTFDC1Q9BY42 306 aaPredicted RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 H7C1D1 291 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 SLC1A4P43007 532 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 TNNI2P48788 182 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 AP1ARQ63HQ0 302 aa17.79■□□□□ 0.44
PKP4-205ENST00000426248 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
PKP4-205ENST00000426248 GOLGA6L7A0A1B0GV03 622 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 SPTLC2O15270 562 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 FOXP2O15409 715 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 NLRP12P59046 1061 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 MTF1Q14872 753 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 TNIP1Q15025 636 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 CERS5Q8N5B7 392 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 EHD4Q9H223 541 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 TJP1Q07157 1748 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 ZNF202O95125 648 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 SPICE1Q8N0Z3 855 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 ZNRF3Q9ULT6 936 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
PKP4-205ENST00000426248 GOLGA6BA6NDN3 693 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 SYKP43405 635 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 MICALCLQ6ZW33 695 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 SOWAHDA6NJG2 315 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 RSRC2Q7L4I2 434 aaKnown RBP17.77■□□□□ 0.44
PKP4-205ENST00000426248 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 GUCA1BQ9UMX6 200 aa17.77■□□□□ 0.44
PKP4-205ENST00000426248 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.77■□□□□ 0.44
PKP4-205ENST00000426248 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.43
PKP4-205ENST00000426248 LRRIQ3A6PVS8 624 aaPredicted RBP17.77■□□□□ 0.43
PKP4-205ENST00000426248 KRT2P35908 639 aa17.77■□□□□ 0.43
PKP4-205ENST00000426248 TRMT44Q8IYL2 757 aaKnown RBP17.77■□□□□ 0.43
PKP4-205ENST00000426248 NBPF3Q9H094 633 aa17.77■□□□□ 0.43
PKP4-205ENST00000426248 SLC35F6Q8N357 371 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 CEP95Q96GE4 821 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 L1RE1Q9UN81 338 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 UBE2Q2LH0YL09 131 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 MAP2K7O14733 419 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 SPECC1Q5M775 1068 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 SGSM3Q96HU1 749 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 ALDH8A1Q9H2A2 487 aaPredicted RBP17.76■□□□□ 0.43
PKP4-205ENST00000426248 CLEC11AQ9Y240 323 aa17.76■□□□□ 0.43
PKP4-205ENST00000426248 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 IFNAR1P17181 557 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 GGCXP38435 758 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 PPP4CP60510 307 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 ICA1Q05084 483 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 SF3A3Q12874 501 aaKnown RBP eCLIP17.75■□□□□ 0.437e-7■■■■□ 21.2
PKP4-205ENST00000426248 ZNF174Q15697 407 aa17.75■□□□□ 0.43
PKP4-205ENST00000426248 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
PKP4-205ENST00000426248 CEP131Q9UPN4 1083 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms