RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 Q6ZUG5 572 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 FGD4Q96M96 766 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 FLRT1Q9NZU1 646 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 LOC102724159A0A0B4J2E5 919 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 ZBTB43O43298 467 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 ALAS1P13196 640 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 FUT2Q10981 343 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 TRAF1Q13077 416 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 TOB2Q14106 344 aaPredicted RBP16.76■□□□□ 0.27
PTPN18-204ENST00000420717 PWP2Q15269 919 aaKnown RBP16.76■□□□□ 0.27
PTPN18-204ENST00000420717 CCL14Q16627 93 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 MAMDC4Q6UXC1 1216 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 DPP9Q86TI2 863 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 MICU3Q86XE3 530 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 BRF1Q92994 677 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 AMNQ9BXJ7 453 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 PAK6Q9NQU5 681 aaPredicted RBP16.76■□□□□ 0.27
PTPN18-204ENST00000420717 CYP39A1Q9NYL5 469 aa16.76■□□□□ 0.27
PTPN18-204ENST00000420717 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
PTPN18-204ENST00000420717 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 NFIBO00712 420 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 PPP1R11O60927 126 aaPredicted RBP16.75■□□□□ 0.27
PTPN18-204ENST00000420717 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 FBXO11Q86XK2 927 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 ANKRD35Q8N283 1001 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
PTPN18-204ENST00000420717 HOMER2Q9NSB8 354 aa16.75■□□□□ 0.27
PTPN18-204ENST00000420717 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
PTPN18-204ENST00000420717 KIAA0100Q14667 2235 aaKnown RBP16.74■□□□□ 0.27
PTPN18-204ENST00000420717 RPTORQ8N122 1335 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 PNMA6FA0A0J9YX94 578 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 PGK2P07205 417 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 CYBAP13498 195 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
PTPN18-204ENST00000420717 RTN1Q16799 776 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 MFSD14CQ5VZR4 134 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
PTPN18-204ENST00000420717 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
PTPN18-204ENST00000420717 CCDC196A0A1B0GTZ2 297 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 OPLAHO14841 1288 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 GJB1P08034 283 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 CCL5P13501 91 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 PRKAR2AP13861 404 aaKnown RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 TAL1P17542 331 aaPredicted RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 RXRAP19793 462 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 FGD1P98174 961 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 CACNB2Q08289 660 aaPredicted RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 APOBRQ0VD83 1088 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 TRIM32Q13049 653 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 MTFR1Q15390 333 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 TEX2Q8IWB9 1127 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 MORC4Q8TE76 937 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 DDX11Q96FC9 970 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 ZNF274Q96GC6 653 aaPredicted RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 PIGSQ96S52 555 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 TINF2Q9BSI4 451 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 MAP3K20Q9NYL2 800 aaKnown RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 MRPL11Q9Y3B7 192 aaKnown RBP16.73■□□□□ 0.27
PTPN18-204ENST00000420717 MCM3APO60318 1980 aa16.73■□□□□ 0.27
PTPN18-204ENST00000420717 ASTN1O14525 1302 aa16.72■□□□□ 0.27
PTPN18-204ENST00000420717 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
PTPN18-204ENST00000420717 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
PTPN18-204ENST00000420717 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
PTPN18-204ENST00000420717 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
PTPN18-204ENST00000420717 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.72■□□□□ 0.27
PTPN18-204ENST00000420717 UNC93B1Q9H1C4 597 aa16.72■□□□□ 0.27
PTPN18-204ENST00000420717 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
PTPN18-204ENST00000420717 POTEB2H3BUK9 544 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.27
PTPN18-204ENST00000420717 CDC27P30260 824 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 HSD17B4P51659 736 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 USH1GQ495M9 461 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 SLC30A10Q6XR72 485 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 MCF2L2Q86YR7 1114 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 CCDC144CPQ8IYA2 1237 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
PTPN18-204ENST00000420717 KIF2CQ99661 725 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 CRISPLD2Q9H0B8 497 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 HMX1Q9NP08 348 aaPredicted RBP16.71■□□□□ 0.27
PTPN18-204ENST00000420717 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
PTPN18-204ENST00000420717 PCDHA1Q9Y5I3 950 aa16.71■□□□□ 0.27
PTPN18-204ENST00000420717 SOWAHBA6NEL2 793 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 CCDC85CA6NKD9 419 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 CYP2C19P33261 490 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 GJA8P48165 433 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
PTPN18-204ENST00000420717 RGS19P49795 217 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms