RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PLS1Q14651 629 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 NPY5RQ15761 445 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 IFFO2Q5TF58 517 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
TMEM53-206ENST00000420706 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 SMCR8Q8TEV9 937 aaPredicted RBP14.37□□□□□ -0.11
TMEM53-206ENST00000420706 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
TMEM53-206ENST00000420706 TEX13BQ9BXU2 312 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 ZMYND12Q9H0C1 365 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 ZFYVE28Q9HCC9 887 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
TMEM53-206ENST00000420706 A0A0G2JMZ2 1700 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 ADGRA2Q96PE1 1338 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 ALDH1A1P00352 501 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 MMP1P03956 469 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 ERVK-9P63128 1117 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 ERVK-24P63145 666 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 PKP1Q13835 747 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 TKFCQ3LXA3 575 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 ANKRD13CQ8N6S4 541 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 TRERF1Q96PN7 1200 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 SPATC1LQ9H0A9 340 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 C6orf50Q9HD87 102 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 MORF4L1Q9UBU8 362 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 CIZ1Q9ULV3 898 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-206ENST00000420706 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
TMEM53-206ENST00000420706 VPS37CA5D8V6 355 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-206ENST00000420706 OPLAHO14841 1288 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 ADAMTS3O15072 1205 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 CA12O43570 354 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 TLR2O60603 784 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 BRD1O95696 1058 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 CALML3P27482 149 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 GNA11P29992 359 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 NUCB2P80303 420 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 GALNT17Q6IS24 598 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 C17orf99Q6UX52 265 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 BLIDQ8IZY5 108 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 DAGLBQ8NCG7 672 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 GPRC5AQ8NFJ5 357 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 CLEC4DQ8WXI8 215 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 TBC1D5Q92609 795 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 MOV10L1Q9BXT6 1211 aaKnown RBP14.35□□□□□ -0.11
TMEM53-206ENST00000420706 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 PCDHA4Q9UN74 947 aa14.35□□□□□ -0.11
TMEM53-206ENST00000420706 BTBD18B2RXH4 712 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 SLC25A27O95847 323 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 BCRP11274 1271 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 KRT2P35908 639 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 ADCY7P51828 1080 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
TMEM53-206ENST00000420706 CRHR2Q13324 411 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
TMEM53-206ENST00000420706 DIS3L2Q8IYB7 885 aaKnown RBP14.34□□□□□ -0.11
TMEM53-206ENST00000420706 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 OXER1Q8TDS5 423 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 GLT8D2Q9H1C3 349 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 RNF146Q9NTX7 359 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 CHMP5Q9NZZ3 219 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 CPA4Q9UI42 421 aa14.34□□□□□ -0.11
TMEM53-206ENST00000420706 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 M0R2N6 131 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 NFIBO00712 420 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 MEIS2O14770 477 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 ZSCAN22P10073 491 aaPredicted RBP14.33□□□□□ -0.12
TMEM53-206ENST00000420706 ERCC3P19447 782 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 COPB2P35606 906 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 MCTP1Q6DN14 999 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 NCAPG2Q86XI2 1143 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 MCF2L2Q86YR7 1114 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 SAMD3Q8N6K7 520 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 BICD2Q8TD16 824 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 CUL5Q93034 780 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 R3HDMLQ9H3Y0 253 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 BRMS1Q9HCU9 246 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 HOMER2Q9NSB8 354 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 RNF186Q9NXI6 227 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 BIN2Q9UBW5 565 aaPredicted RBP14.33□□□□□ -0.12
TMEM53-206ENST00000420706 PCDHA6Q9UN73 950 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 PCDHA8Q9Y5H6 950 aa14.33□□□□□ -0.12
TMEM53-206ENST00000420706 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 CFBP00751 764 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 U2AF2P26368 475 aaKnown RBP eCLIP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 CCNA1P78396 465 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 GHRHRQ02643 423 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 NR5A1Q13285 461 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 FOXD4L5Q5VV16 416 aaPredicted RBP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 FOXD4L4Q8WXT5 416 aaPredicted RBP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms