RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 USP17L4A6NCW7 530 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 IVLP07476 585 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 FGRP09769 529 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 KCNQ4P56696 695 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 C2orf54Q08AI8 447 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 LETM2Q2VYF4 491 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 USP17L1Q7RTZ2 530 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 SRLQ86TD4 932 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 CNOT6LQ96LI5 555 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 MED4Q9NPJ6 270 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 A0A1W2PQC6 194 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 PLCG1P19174 1290 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 KIF5AQ12840 1032 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 DZIP1Q86YF9 867 aaKnown RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 CCDC47Q96A33 483 aaKnown RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 MYH13Q9UKX3 1938 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 KLRC4O43908 158 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 DDB1Q16531 1140 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 EHBP1Q8NDI1 1231 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 CCDC42Q96M95 316 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 BSDC1Q9NW68 430 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 ZNF652Q9Y2D9 606 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 BCL9LQ86UU0 1499 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 COL16A1Q07092 1604 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 FCER1AP12319 257 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 CKAP4Q07065 602 aaKnown RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 SPA17Q15506 151 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 ANKRD40Q6AI12 368 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 CABP7Q86V35 215 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 DHX37Q8IY37 1157 aaKnown RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 GIMAP8Q8ND71 665 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 ATP8A2Q9NTI2 1148 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
SEMA3B-203ENST00000419007 PLEKP08567 350 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 STK4Q13043 487 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 AFAP1L1Q8TED9 768 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 LRWD1Q9UFC0 647 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 EP400Q96L91 3159 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 PDE2AO00408 941 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 SRGNP10124 158 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 LRRC15Q8TF66 581 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 P2RX5Q93086 422 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 DUSP9Q99956 384 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 VAT1LQ9HCJ6 419 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 RHOBTB3O94955 611 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 MYBL2P10244 700 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 MCM3P25205 808 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 KCNB1Q14721 858 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 IL17RBQ9NRM6 502 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 TAF1P21675 1872 aa16.94■□□□□ 0.3
SEMA3B-203ENST00000419007 COL4A1P02462 1669 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 FKBP15Q5T1M5 1219 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 PAPD7Q5XG87 772 aaKnown RBP16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 SECISBP2LQ93073 1101 aaKnown RBP16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 HPCAL4Q9UM19 191 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 GGCXP38435 758 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 TECP42680 631 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 ZBED6P86452 979 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 SLC39A2Q9NP94 309 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
SEMA3B-203ENST00000419007 SYF2O95926 243 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 CXCR5P32302 372 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 COG1Q8WTW3 980 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 NAPAP54920 295 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 CCDC70Q6NSX1 233 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 LRRC31Q6UY01 552 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 DHTKD1Q96HY7 919 aaPredicted RBP16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 SELENOOQ9BVL4 669 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 RABEP2Q9H5N1 569 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 MMRN2Q9H8L6 949 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 CCNE1P24864 410 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 ZNF444Q8N0Y2 327 aaPredicted RBP16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 NUP58Q9BVL2 599 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
SEMA3B-203ENST00000419007 BICDL2A1A5D9 508 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 RASSF10A6NK89 507 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 CYTH3O43739 400 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 MEA1Q16626 185 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 IFIH1Q9BYX4 1025 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 TRIM9Q9C026 710 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms