RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 FANCBQ8NB91 859 aa21.69■■□□□ 1.06
PTCD3-204ENST00000418628 BRF1Q92994 677 aa21.69■■□□□ 1.06
PTCD3-204ENST00000418628 MAML3Q96JK9 1138 aa21.69■■□□□ 1.06
PTCD3-204ENST00000418628 CYP46A1Q9Y6A2 500 aa21.69■■□□□ 1.06
PTCD3-204ENST00000418628 ALPK3Q96L96 1907 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 KLF18A0A0U1RQI7 1052 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 ZBTB5O15062 677 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 PGK2P07205 417 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 MTFR1Q15390 333 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 DPP9Q86TI2 863 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 SRBD1Q8N5C6 995 aaKnown RBP21.68■■□□□ 1.06
PTCD3-204ENST00000418628 FAM133AQ8N9E0 248 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 LZTS2Q9BRK4 669 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 UPF3BQ9BZI7 483 aaKnown RBP21.68■■□□□ 1.06
PTCD3-204ENST00000418628 MAF1Q9H063 256 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 FAM217BQ9NTX9 383 aaPredicted RBP21.68■■□□□ 1.06
PTCD3-204ENST00000418628 PFASO15067 1338 aa21.68■■□□□ 1.06
PTCD3-204ENST00000418628 ASTN1O14525 1302 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 ABCB11O95342 1321 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 CNTNAP5Q8WYK1 1306 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 NFIBO00712 420 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 ZBTB43O43298 467 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 GNAQP50148 359 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 GHRHRQ02643 423 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 FUT2Q10981 343 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 PIGSQ96S52 555 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 ALDH8A1Q9H2A2 487 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-204ENST00000418628 PAK6Q9NQU5 681 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-204ENST00000418628 SLC5A4Q9NY91 659 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 CYP39A1Q9NYL5 469 aa21.67■■□□□ 1.06
PTCD3-204ENST00000418628 OPLAHO14841 1288 aa21.66■■□□□ 1.06
PTCD3-204ENST00000418628 UBXN2AP68543 259 aa21.66■■□□□ 1.06
PTCD3-204ENST00000418628 ZNF467Q7Z7K2 595 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-204ENST00000418628 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
PTCD3-204ENST00000418628 DHX16O60231 1041 aaKnown RBP21.65■■□□□ 1.06
PTCD3-204ENST00000418628 SLC4A3P48751 1232 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 CACNB2Q08289 660 aaPredicted RBP21.65■■□□□ 1.06
PTCD3-204ENST00000418628 MAMDC4Q6UXC1 1216 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 FBXO11Q86XK2 927 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 ANKRD35Q8N283 1001 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 MSL3Q8N5Y2 521 aaKnown RBP21.65■■□□□ 1.06
PTCD3-204ENST00000418628 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 AMNQ9BXJ7 453 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 UNC93B1Q9H1C4 597 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 VAT1LQ9HCJ6 419 aa21.65■■□□□ 1.06
PTCD3-204ENST00000418628 PNMA6FA0A0J9YX94 578 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 GOLGA8AA7E2F4 631 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 GOLGA8BA8MQT2 603 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 CYBAP13498 195 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 CCL5P13501 91 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 PRKAR2AP13861 404 aaKnown RBP21.64■■□□□ 1.05
PTCD3-204ENST00000418628 CDC27P30260 824 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 RBM25P49756 843 aaKnown RBP21.64■■□□□ 1.05
PTCD3-204ENST00000418628 PPP2R5BQ15173 497 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 RTN1Q16799 776 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 USH1GQ495M9 461 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 SYNE3Q6ZMZ3 975 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 KIF2CQ99661 725 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 MYH7BA7E2Y1 1941 aa21.64■■□□□ 1.05
PTCD3-204ENST00000418628 RPTORQ8N122 1335 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 SYNGAP1Q96PV0 1343 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 CCDC85CA6NKD9 419 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 FGD1P98174 961 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 SLC30A10Q6XR72 485 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 HOMER1Q86YM7 354 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 CMTR1Q8N1G2 835 aaKnown RBP21.63■■□□□ 1.05
PTCD3-204ENST00000418628 DDX11Q96FC9 970 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 TINF2Q9BSI4 451 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 PDE4DIPQ5VU43 2346 aa21.63■■□□□ 1.05
PTCD3-204ENST00000418628 SOWAHBA6NEL2 793 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 CYP2C19P33261 490 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 CNTN2Q02246 1040 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 MFSD14CQ5VZR4 134 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 TRPV1Q8NER1 839 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 MORC4Q8TE76 937 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.62■■□□□ 1.05
PTCD3-204ENST00000418628 PDRG1Q9NUG6 133 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 NRBP1Q9UHY1 535 aa21.62■■□□□ 1.05
PTCD3-204ENST00000418628 DOCK5Q9H7D0 1870 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 POTEFA5A3E0 1075 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 POTEB2H3BUK9 544 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 GJB1P08034 283 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 METAP2P50579 478 aaKnown RBP eCLIP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 RPS6P62753 249 aaKnown RBP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 NTRK3Q16288 839 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 NSMFQ6X4W1 530 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
PTCD3-204ENST00000418628 ZNF274Q96GC6 653 aaPredicted RBP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 BIN2Q9UBW5 565 aaPredicted RBP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 MRPL11Q9Y3B7 192 aaKnown RBP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 MKI67P46013 3256 aaKnown RBP21.61■■□□□ 1.05
PTCD3-204ENST00000418628 LOC102724159A0A0B4J2E5 919 aa21.6■■□□□ 1.05
PTCD3-204ENST00000418628 CCND3P30281 292 aaPredicted RBP21.6■■□□□ 1.05
PTCD3-204ENST00000418628 BAATQ14032 418 aaPredicted RBP21.6■■□□□ 1.05
PTCD3-204ENST00000418628 PWP2Q15269 919 aaKnown RBP21.6■■□□□ 1.05
PTCD3-204ENST00000418628 RNF207Q6ZRF8 634 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms