RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 THAP12O43422 761 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 SNX16P57768 344 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 GEN1Q17RS7 908 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 DAB2IPQ5VWQ8 1189 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 RNF169Q8NCN4 708 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 MMEP08473 750 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 PYGBP11216 843 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
SATB1-204ENST00000417717 CATSPER1Q8NEC5 780 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 CALML6Q8TD86 181 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 CD248Q9HCU0 757 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 IL1RAPL1Q9NZN1 696 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 AMFRQ9UKV5 643 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 GGCXP38435 758 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 ASIC2Q16515 512 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 FAM43BQ6ZT52 329 aaPredicted RBP11.22□□□□□ -0.61
SATB1-204ENST00000417717 Q6ZUG5 572 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 ANKRD44Q8N8A2 993 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 TUBGCP3Q96CW5 907 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 CUTAO60888 179 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 CYB5D1Q6P9G0 228 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 EPN3Q9H201 632 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 ZBTB43O43298 467 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
SATB1-204ENST00000417717 CDR2Q01850 454 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 PPP1R42Q7Z4L9 355 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 TRIM74Q86UV6 250 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 TRIM73Q86UV7 250 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 TMTC2Q8N394 836 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 CHMP6Q96FZ7 201 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 ORC6Q9Y5N6 252 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 TRPM2O94759 1503 aa11.22□□□□□ -0.61
SATB1-204ENST00000417717 KCNK3O14649 394 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 DEFA1P59665 94 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 DEFA3P59666 94 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 NAA30Q147X3 362 aaPredicted RBP11.21□□□□□ -0.61
SATB1-204ENST00000417717 ANO1Q5XXA6 986 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
SATB1-204ENST00000417717 NEK9Q8TD19 979 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 BTBD7Q9P203 1132 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 TEKT2Q9UIF3 430 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 BAG5Q9UL15 447 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 TMA7Q9Y2S6 64 aaKnown RBP11.21□□□□□ -0.61
SATB1-204ENST00000417717 RAB14P61106 215 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 GRK7Q8WTQ7 553 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 COG1Q8WTW3 980 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 PHKBQ93100 1093 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 TRIM56Q9BRZ2 755 aaKnown RBP11.21□□□□□ -0.61
SATB1-204ENST00000417717 KLHL25Q9H0H3 589 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 ECT2Q9H8V3 914 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 ZNF287Q9HBT7 754 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 NOD2Q9HC29 1040 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 CDC42BPBQ9Y5S2 1711 aa11.21□□□□□ -0.61
SATB1-204ENST00000417717 GJC1P36383 396 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 CUL1Q13616 776 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 ARHGAP44Q17R89 818 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 RASSF3Q86WH2 238 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 SIX5Q8N196 739 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 AGGF1Q8N302 714 aaeCLIP11.21□□□□□ -0.62
SATB1-204ENST00000417717 GRAMD1AQ96CP6 724 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 PITPNM3Q9BZ71 974 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 DPH5Q9H2P9 285 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 ST7Q9NRC1 585 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 SNX5Q9Y5X3 404 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 NPC1L1Q9UHC9 1359 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 IL16Q14005 1332 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 CSGALNACT2Q8N6G5 542 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 LRRC37BQ96QE4 947 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.62
SATB1-204ENST00000417717 OLFML3Q9NRN5 406 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 CNNM1Q9NRU3 951 aa11.21□□□□□ -0.62
SATB1-204ENST00000417717 ZMYND10O75800 440 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 TNFAIP3P21580 790 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 MRPL28Q13084 256 aaKnown RBP11.2□□□□□ -0.62
SATB1-204ENST00000417717 TUBA3CQ13748 450 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 PODNQ7Z5L7 613 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 GABPB2Q8TAK5 448 aaPredicted RBP11.2□□□□□ -0.62
SATB1-204ENST00000417717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
SATB1-204ENST00000417717 TCEANC2Q96MN5 208 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 CAB39Q9Y376 341 aaPredicted RBP11.2□□□□□ -0.62
SATB1-204ENST00000417717 INSRP06213 1382 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 TFAP4Q01664 338 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 KLHL30Q0D2K2 578 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 BZW1Q7L1Q6 419 aaKnown RBP11.2□□□□□ -0.62
SATB1-204ENST00000417717 DDX42Q86XP3 938 aaKnown RBP eCLIP11.2□□□□□ -0.62
SATB1-204ENST00000417717 WDR60Q8WVS4 1066 aa11.2□□□□□ -0.62
SATB1-204ENST00000417717 TAB2Q9NYJ8 693 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms