RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 COPB2P35606 906 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 DDIT3P35638 169 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 SNRNP48Q6IEG0 339 aaKnown RBP13.32□□□□□ -0.28
SYNC-203ENST00000417633 GALNT17Q6IS24 598 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYNC-203ENST00000417633 DNAJC5GQ8N7S2 189 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 GPRC5AQ8NFJ5 357 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 CCDC148Q8NFR7 591 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 ZMYND12Q9H0C1 365 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 GLT8D2Q9H1C3 349 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
SYNC-203ENST00000417633 SYT1P21579 422 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 NAPAP54920 295 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 CRHR2Q13324 411 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 PLS1Q14651 629 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 USH1GQ495M9 461 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 KRT40Q6A162 431 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 SAMD3Q8N6K7 520 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 DAGLBQ8NCG7 672 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 CLEC4DQ8WXI8 215 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 MOV10L1Q9BXT6 1211 aaKnown RBP13.31□□□□□ -0.28
SYNC-203ENST00000417633 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
SYNC-203ENST00000417633 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
SYNC-203ENST00000417633 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 OPLAHO14841 1288 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 PEX10O60683 326 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 MMP1P03956 469 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 ALAS1P13196 640 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 CALML3P27482 149 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 GNA11P29992 359 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 NLRP5P59047 1200 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 CCNA1P78396 465 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 GHRHRQ02643 423 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 TRIM29Q14134 588 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 NPY5RQ15761 445 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 MROH8Q9H579 483 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 FBXO40Q9UH90 709 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
SYNC-203ENST00000417633 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 STX6O43752 255 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
SYNC-203ENST00000417633 ERCC3P19447 782 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
SYNC-203ENST00000417633 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
SYNC-203ENST00000417633 MUM1L1Q5H9M0 696 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 BICD2Q8TD16 824 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 ACAD9Q9H845 621 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 PCDHA4Q9UN74 947 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 KCNJ14Q9UNX9 436 aa13.29□□□□□ -0.28
SYNC-203ENST00000417633 H3BQV1 296 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 M0R2N6 131 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 MEIS2O14770 477 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 TRPA1O75762 1119 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
SYNC-203ENST00000417633 HSD17B4P51659 736 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 ADCY7P51828 1080 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 GUCY1B3Q02153 619 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 NCAPG2Q86XI2 1143 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 CUL5Q93034 780 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 PORCNQ9H237 461 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 BRMS1Q9HCU9 246 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
SYNC-203ENST00000417633 MTMR6Q9Y217 621 aa13.28□□□□□ -0.28
SYNC-203ENST00000417633 GCOM1H8Y6P7 765 aaPredicted RBP13.27□□□□□ -0.29
SYNC-203ENST00000417633 NFIBO00712 420 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 STRNO43815 780 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 POLR2MP0CAP2 368 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 U2AF2P26368 475 aaKnown RBP eCLIP13.27□□□□□ -0.29
SYNC-203ENST00000417633 MAPK4P31152 587 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 KRT2P35908 639 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 FOSBP53539 338 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.29
SYNC-203ENST00000417633 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.29
SYNC-203ENST00000417633 MCTP2Q6DN12 878 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 TBC1D5Q92609 795 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 FOXP1Q9H334 677 aaPredicted RBP13.27□□□□□ -0.29
SYNC-203ENST00000417633 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
SYNC-203ENST00000417633 ZNFX1Q9P2E3 1918 aaKnown RBP13.27□□□□□ -0.29
SYNC-203ENST00000417633 BTBD18B2RXH4 712 aa13.26□□□□□ -0.29
SYNC-203ENST00000417633 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms