RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 HPCAL4Q9UM19 191 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 TNRC6CQ9HCJ0 1690 aaKnown RBP14.33□□□□□ -0.11
LRRTM1-205ENST00000417012 PSMA7O14818 248 aa14.33□□□□□ -0.11
LRRTM1-205ENST00000417012 LRRC31Q6UY01 552 aa14.33□□□□□ -0.11
LRRTM1-205ENST00000417012 CRACR2AQ9BSW2 395 aa14.33□□□□□ -0.11
LRRTM1-205ENST00000417012 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.11
LRRTM1-205ENST00000417012 THAP9Q9H5L6 903 aa14.33□□□□□ -0.11
LRRTM1-205ENST00000417012 SRGAP2O75044 1071 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 DNM2P50570 870 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 ZNF662Q6ZS27 426 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 COG1Q8WTW3 980 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 DISC1Q9NRI5 854 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 SYF2O95926 243 aaKnown RBP14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 USP17L8P0C7I0 530 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 BRD2P25440 801 aaKnown RBP14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 GRIK5Q16478 980 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 IQCEQ6IPM2 695 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 WDR59Q6PJI9 974 aa14.33□□□□□ -0.12
LRRTM1-205ENST00000417012 CALML3P27482 149 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 PFKFB3Q16875 520 aaPredicted RBP14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 TRAPPC3LQ5T215 181 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 DZIP1Q86YF9 867 aaKnown RBP14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 ZNF507Q8TCN5 953 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 CRNKL1Q9BZJ0 848 aaKnown RBP14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 MCM9Q9NXL9 1143 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 TFR2Q9UP52 801 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 COL24A1Q17RW2 1714 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 VEGFAP15692 232 aaPredicted RBP14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 KCNB1Q14721 858 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 MEA1Q16626 185 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 CCDC70Q6NSX1 233 aa14.32□□□□□ -0.12
LRRTM1-205ENST00000417012 ANO9A1A5B4 782 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 MAGEA9P43362 315 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 PMS1P54277 932 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 NOC3LQ8WTT2 800 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 NUP58Q9BVL2 599 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 EXOC1Q9NV70 894 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 B4DLN1 442 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 EIF3CLB5ME19 914 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 PPFIA4O75335 1185 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 FGRP09769 529 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 EIF3CQ99613 913 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 DLEC1Q9Y238 1755 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 TAF1LQ8IZX4 1826 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 MYL1P05976 194 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 SRGNP10124 158 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 DTHD1Q6ZMT9 781 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 CCDC170Q8IYT3 715 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 BLIDQ8IZY5 108 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 DYNLL2Q96FJ2 89 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 JADE2Q9NQC1 790 aa14.31□□□□□ -0.12
LRRTM1-205ENST00000417012 TSPY2A6NKD2 308 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 ZMYND10O75800 440 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 IDEP14735 1019 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 PCMTD1Q96MG8 357 aaPredicted RBP14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 GDAP1L1Q96MZ0 367 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 TUBGCP2Q9BSJ2 902 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 SELENOOQ9BVL4 669 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 IRS2Q9Y4H2 1338 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 KIF5BP33176 963 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 UBA7P41226 1012 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 CSGALNACT2Q8N6G5 542 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 CNBD1Q8NA66 436 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 AGPAT5Q9NUQ2 364 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 MTMR7Q9Y216 660 aa14.3□□□□□ -0.12
LRRTM1-205ENST00000417012 RHOBTB3O94955 611 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 ZBED6P86452 979 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 GSPT2Q8IYD1 628 aaKnown RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 C4orf32Q8N8J7 132 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 SH3RF3Q8TEJ3 882 aaPredicted RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 RIN2Q8WYP3 895 aaPredicted RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 TSGA10Q9BZW7 698 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 LACRTQ9GZZ8 138 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 NHSQ6T4R5 1651 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 MACROD2A1Z1Q3 448 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 ORC4O43929 436 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 GGCXP38435 758 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 CORO7P57737 925 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 TBC1D8BQ0IIM8 1120 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 TTC31Q49AM3 519 aaPredicted RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 TTI2Q6NXR4 508 aa14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
LRRTM1-205ENST00000417012 ATP8A2Q9NTI2 1148 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms