RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 LMNB1P20700 586 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 IQCB1Q15051 598 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 DTHD1Q6ZMT9 781 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 UIMC1Q96RL1 719 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 FEZ1Q99689 392 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 BECN2A8MW95 431 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 GOLGA6L19H0YKK7 550 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 TDP2O95551 362 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 EPS15P42566 896 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 DGKZQ13574 1117 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 POSTNQ15063 836 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 PLIN2Q99541 437 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
SMPD4P1-201ENST00000416717 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 NEMFO60524 1076 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 PTMAP06454 111 aaKnown RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 ASNSP08243 561 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 STAT2P52630 851 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 NLRP12P59046 1061 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 DHX40Q8IX18 779 aaKnown RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 RASSF8Q8NHQ8 419 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 DDNO94850 711 aaPredicted RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 INPP5BP32019 993 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 KARSQ15046 597 aaKnown RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 FBXO11Q86XK2 927 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 FBXO28Q9NVF7 368 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 GPRC5DQ9NZD1 345 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 TUBE1Q9UJT0 475 aa12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 MORC2Q9Y6X9 1032 aaPredicted RBP12.11□□□□□ -0.47
SMPD4P1-201ENST00000416717 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 SLC37A4O43826 429 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 TECP42680 631 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 MAP3K10Q02779 954 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 SPC24Q8NBT2 197 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 GJA10Q969M2 543 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 SYT17Q9BSW7 474 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 VCPKMTQ9H867 229 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
SMPD4P1-201ENST00000416717 EDIL3O43854 480 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 SLFN14P0C7P3 912 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 TXKP42681 527 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 PRKG1Q13976 671 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 GPC2Q8N158 579 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 TRIM5Q9C035 493 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 CAVIN2O95810 425 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 YBX3P16989 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 HIRAP54198 1017 aaPredicted RBP12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 DLK2Q6UY11 383 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 MAN1B1Q9UKM7 699 aa12.09□□□□□ -0.47
SMPD4P1-201ENST00000416717 BMP6P22004 513 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 TXLNAP40222 546 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 UBA7P41226 1012 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 MMP14P50281 582 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 CALCRLQ16602 461 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 KANK3Q6NY19 840 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 BTNL9Q6UXG8 535 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 SH2D4AQ9H788 454 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 LAD1O00515 517 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 MEIS2O14770 477 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 STAT6P42226 847 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 E2F4Q16254 413 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 IQUBQ8NA54 791 aa12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
SMPD4P1-201ENST00000416717 CHURC1Q8WUH1 139 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 WRNIP1Q96S55 665 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 DDX25Q9UHL0 483 aaKnown RBP12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 SYNPO2Q9UMS6 1093 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 DOCK1Q14185 1865 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 MARCH6O60337 910 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 CTNND1O60716 968 aaKnown RBP12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 PRPHP41219 470 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 MTMR2Q13614 643 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 RRAGBQ5VZM2 374 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms