RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 SSBP05455 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCN4B-202ENST00000415030 PRCPP42785 496 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 RRAGAQ7L523 313 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 HMGB1P1B2RPK0 211 aaPredicted RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 LAD1O00515 517 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 CHUKO15111 745 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 NEDD9Q14511 834 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 HEATR3Q7Z4Q2 680 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 CABP7Q86V35 215 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 ZNF444Q8N0Y2 327 aaPredicted RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 NSRP1Q9H0G5 558 aaKnown RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 FAM207AQ9NSI2 230 aaPredicted RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 MRC1P22897 1456 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 CYP27B1O15528 508 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 VWA3BQ502W6 1294 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 TTC19Q6DKK2 380 aaPredicted RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 GSPT2Q8IYD1 628 aaKnown RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 NR1D1P20393 614 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 IBSPP21815 317 aaPredicted RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 RIN2Q8WYP3 895 aaPredicted RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 C6orf50Q9HD87 102 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 TRIM37O94972 964 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 GNA11P29992 359 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
SCN4B-202ENST00000415030 KCTD16Q68DU8 428 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 RPAINQ86UA6 219 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 SCLT1Q96NL6 688 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 DISC1Q9NRI5 854 aa12.84□□□□□ -0.35
SCN4B-202ENST00000415030 PDCLQ13371 301 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 KCNB1Q14721 858 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 RSRC1Q96IZ7 334 aaKnown RBP12.83□□□□□ -0.36
SCN4B-202ENST00000415030 SPAG5Q96R06 1193 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 HEXIM1O94992 359 aaKnown RBP12.83□□□□□ -0.36
SCN4B-202ENST00000415030 GUCY2DQ02846 1103 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 FOXR1Q6PIV2 292 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 DNAJC7Q99615 494 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 CRYBG1Q9Y4K1 1723 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 ABCC6O95255 1503 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
SCN4B-202ENST00000415030 SLC8A1P32418 973 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 CACNA2D3Q8IZS8 1091 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 SPATA4Q8NEY3 305 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.36
SCN4B-202ENST00000415030 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
SCN4B-202ENST00000415030 ATP2C2O75185 946 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
SCN4B-202ENST00000415030 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 KIF11P52732 1056 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 SFMBT2Q5VUG0 894 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 LCORLQ8N3X6 602 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 SPATA20Q8TB22 786 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 AK8Q96MA6 479 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
SCN4B-202ENST00000415030 TRIM10Q9UDY6 481 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 MOCS3O95396 460 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 PBX1P40424 430 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 UBLCP1Q8WVY7 318 aaPredicted RBP12.82□□□□□ -0.36
SCN4B-202ENST00000415030 STMN4Q9H169 189 aaPredicted RBP12.82□□□□□ -0.36
SCN4B-202ENST00000415030 ZHX3Q9H4I2 956 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 EPB41L5Q9HCM4 733 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 PRKAB2O43741 272 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 SRGNP10124 158 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 NAPAP54920 295 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 RPS6KA1Q15418 735 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 SNCBQ16143 134 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 KRT25Q7Z3Z0 450 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 DYDC1Q8WWB3 177 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 CLGNO14967 610 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 MAP2K1Q02750 393 aaPredicted RBP12.82□□□□□ -0.36
SCN4B-202ENST00000415030 IFT88Q13099 833 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 ADSSL1Q8N142 457 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 HINFPQ9BQA5 517 aa12.82□□□□□ -0.36
SCN4B-202ENST00000415030 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
SCN4B-202ENST00000415030 DRP2Q13474 957 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms