RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 PDE4DQ08499 809 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 FAM76AQ8TAV0 307 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 BCAS4Q8TDM0 211 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 NOC4LQ9BVI4 516 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 KRT14P02533 472 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 PLCG1P19174 1290 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 DTHD1Q6ZMT9 781 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 BLIDQ8IZY5 108 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 SLC44A5Q8NCS7 719 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 PRDX5P30044 214 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 SECISBP2LQ93073 1101 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 TTYH3Q9C0H2 523 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 ARHGAP20Q9P2F6 1191 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 FAM153BP0C7A2 387 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 SRGNP10124 158 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 ASIC1P78348 528 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 TRIM14Q14142 442 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 PFKFB3Q16875 520 aaPredicted RBP16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 FAM153CQ494X1 144 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 TTMPQ5BVD1 217 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 MIIPQ5JXC2 388 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 MMRN2Q9H8L6 949 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 FAM153AQ9UHL3 310 aa16.27■□□□□ 0.2
SEMA3F-202ENST00000413852 ZEB2O60315 1214 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 HSPA2P54652 639 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 NAP1L1P55209 391 aaKnown RBP16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 LRRC41Q15345 812 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 TXNRD1Q16881 649 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 DYMQ7RTS9 669 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 GJA10Q969M2 543 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 CCDC42Q96M95 316 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 VAT1LQ9HCJ6 419 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 MYH10P35580 1976 aa16.27■□□□□ 0.19
SEMA3F-202ENST00000413852 KIF5AQ12840 1032 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 ICE2Q659A1 982 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 PSMA7O14818 248 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 GUCY2FP51841 1108 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 KRT83P78385 493 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 LETM2Q2VYF4 491 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 CT47A1Q5JQC4 288 aaPredicted RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 IFT81Q8WYA0 676 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 ZNHIT6Q9NWK9 470 aaKnown RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 RMND1Q9NWS8 449 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 CCDC194A0A1B0GVG4 234 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 TECP42680 631 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 MAP9Q49MG5 647 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 ANKRD18AQ8IVF6 992 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 SPATA4Q8NEY3 305 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 RBM12Q9NTZ6 932 aaKnown RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 RBM28Q9NW13 759 aaKnown RBP16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 FAM169AQ9Y6X4 670 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 TAF1P21675 1872 aa16.26■□□□□ 0.19
SEMA3F-202ENST00000413852 IPO7O95373 1038 aaKnown RBP16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 RASSF7Q02833 373 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 MECOMQ03112 1051 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 AENQ8WTP8 325 aaKnown RBP16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 FAM107BQ9H098 131 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 PCDHA6Q9UN73 950 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 PCDHA8Q9Y5H6 950 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 PCDHA13Q9Y5I0 950 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 BMP15O95972 392 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 DNM2P50570 870 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 TFAP4Q01664 338 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 ARID5AQ03989 594 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 MEA1Q16626 185 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 RRAGAQ7L523 313 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 CAPS2Q9BXY5 557 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 NLRC4Q9NPP4 1024 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 SNX12Q9UMY4 172 aa16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 CICQ96RK0 1608 aaPredicted RBP16.25■□□□□ 0.19
SEMA3F-202ENST00000413852 CYTH3O43739 400 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 GIMAP8Q8ND71 665 aaPredicted RBP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 DEF6Q9H4E7 631 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 DCP1AQ9NPI6 582 aaPredicted RBP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 IL17RBQ9NRM6 502 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 NUTM2BA6NNL0 878 aaPredicted RBP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 NUTM2EB1AL46 878 aaPredicted RBP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 SF3A3Q12874 501 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 TADA2BQ86TJ2 420 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 P2RX5Q93086 422 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms