RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 PLXNA1Q9UIW2 1896 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 ZBTB43O43298 467 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
RPE-204ENST00000411934 SLC16A2P36021 539 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 RBM25P49756 843 aaKnown RBP9.54□□□□□ -0.88
RPE-204ENST00000411934 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 ZNF792Q3KQV3 632 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 MAP3K21Q5TCX8 1036 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 Q6ZUG5 572 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 TMTC3Q6ZXV5 915 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 MCF2L2Q86YR7 1114 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 FANCBQ8NB91 859 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 NUP133Q8WUM0 1156 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 AMNQ9BXJ7 453 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 MRPL11Q9Y3B7 192 aaKnown RBP9.54□□□□□ -0.88
RPE-204ENST00000411934 RIPK3Q9Y572 518 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 SYNGAP1Q96PV0 1343 aa9.54□□□□□ -0.88
RPE-204ENST00000411934 ZNFX1Q9P2E3 1918 aaKnown RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 PNMA6FA0A0J9YX94 578 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 KLF18A0A0U1RQI7 1052 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 GOLGA8AA7E2F4 631 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 DHX16O60231 1041 aaKnown RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 MSCO60682 206 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 PEX10O60683 326 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 ALAS1P13196 640 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 RTN1Q16799 776 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 MFSD14CQ5VZR4 134 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 CCDC174Q6PII3 467 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 MAMDC4Q6UXC1 1216 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 MICU3Q86XE3 530 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 FAM177A1Q8N128 213 aaPredicted RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 ANKRD35Q8N283 1001 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 DNERQ8NFT8 737 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 TRIB2Q92519 343 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 BRF1Q92994 677 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 RRP36Q96EU6 259 aaKnown RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 DDX11Q96FC9 970 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 MAML3Q96JK9 1138 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 AGBL1Q96MI9 1066 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 MPHOSPH6Q99547 160 aaKnown RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 LRRC2Q9BYS8 371 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 UBA5Q9GZZ9 404 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 A1CFQ9NQ94 594 aaKnown RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 SEC63Q9UGP8 760 aaKnown RBP9.53□□□□□ -0.88
RPE-204ENST00000411934 RPTORQ8N122 1335 aa9.53□□□□□ -0.88
RPE-204ENST00000411934 B4DLN1 442 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 CYTH3O43739 400 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 INHAP05111 366 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 CYP2B6P20813 491 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 METAP2P50579 478 aaKnown RBP eCLIP9.52□□□□□ -0.89
RPE-204ENST00000411934 MRPL12P52815 198 aaKnown RBP9.52□□□□□ -0.89
RPE-204ENST00000411934 COL9A3Q14050 684 aaPredicted RBP9.52□□□□□ -0.89
RPE-204ENST00000411934 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
RPE-204ENST00000411934 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 FAM133AQ8N9E0 248 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 CHMP4CQ96CF2 233 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 PAK6Q9NQU5 681 aaPredicted RBP9.52□□□□□ -0.89
RPE-204ENST00000411934 GPHNQ9NQX3 736 aaPredicted RBP9.52□□□□□ -0.89
RPE-204ENST00000411934 PDRG1Q9NUG6 133 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 CYP39A1Q9NYL5 469 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 ADD3Q9UEY8 706 aaKnown RBP9.52□□□□□ -0.89
RPE-204ENST00000411934 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
RPE-204ENST00000411934 ASB14A6NK59 587 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 POTEB2H3BUK9 544 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 COBLO75128 1261 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 CYBAP13498 195 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 MORC4Q8TE76 937 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 TINF2Q9BSI4 451 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 TMEM106CQ9BVX2 250 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 GLT8D2Q9H1C3 349 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
RPE-204ENST00000411934 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 BRPF3Q9ULD4 1205 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 LRRC37A2A6NM11 1700 aa9.51□□□□□ -0.89
RPE-204ENST00000411934 LCTP09848 1927 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 NFIBO00712 420 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 PLEKHA8P1O95397 391 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 SEC24BO95487 1268 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 GJB1P08034 283 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 ELNP15502 786 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 IFNAR1P17181 557 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 HSD17B4P51659 736 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 APOBRQ0VD83 1088 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 FUT2Q10981 343 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 SLC35G1Q2M3R5 365 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 USH1GQ495M9 461 aa9.5□□□□□ -0.89
RPE-204ENST00000411934 MUM1L1Q5H9M0 696 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms