RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
NEDD1-202ENST00000411739 FBXO40Q9UH90 709 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 KLF18A0A0U1RQI7 1052 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
NEDD1-202ENST00000411739 MFSD14CQ5VZR4 134 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 CLEC4DQ8WXI8 215 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 BRF1Q92994 677 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
NEDD1-202ENST00000411739 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.93□□□□□ -0.18
NEDD1-202ENST00000411739 HMX1Q9NP08 348 aaPredicted RBP13.93□□□□□ -0.18
NEDD1-202ENST00000411739 DNAJC25-GNG10A0A024R161 153 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 PTPDC1A2A3K4 754 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 DDAH1O94760 285 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
NEDD1-202ENST00000411739 SGMS1Q86VZ5 419 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
NEDD1-202ENST00000411739 FGD4Q96M96 766 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 SLC5A4Q9NY91 659 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 RPTORQ8N122 1335 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 CALML3P27482 149 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 PSMA5P28066 241 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 TKFCQ3LXA3 575 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 SLC30A10Q6XR72 485 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
NEDD1-202ENST00000411739 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
NEDD1-202ENST00000411739 SOWAHBA6NEL2 793 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 PPFIA3O75145 1194 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 TRMT44Q8IYL2 757 aaKnown RBP13.91□□□□□ -0.18
NEDD1-202ENST00000411739 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 ZSWIM6Q9HCJ5 1215 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 WDR19Q8NEZ3 1342 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 ZBTB5O15062 677 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 GJB1P08034 283 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 OLFML2BQ68BL8 750 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 SHISA4Q96DD7 197 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 TINF2Q9BSI4 451 aa13.91□□□□□ -0.18
NEDD1-202ENST00000411739 ASTN1O14525 1302 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 ZBTB43O43298 467 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 EPB41L2O43491 1005 aaKnown RBP13.9□□□□□ -0.18
NEDD1-202ENST00000411739 IGHA2P01877 340 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.18
NEDD1-202ENST00000411739 KIF5BP33176 963 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 MTMR8Q96EF0 704 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
NEDD1-202ENST00000411739 CYP46A1Q9Y6A2 500 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 CDC27P30260 824 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 RNF207Q6ZRF8 634 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
NEDD1-202ENST00000411739 DTNBO60941 627 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 SGPL1O95470 568 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 SNAI1O95863 264 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 TOB2Q14106 344 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 EEPD1Q7L9B9 569 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 LENG1Q96BZ8 264 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 FAM217BQ9NTX9 383 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 CALM1P0DP23 149 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 CALM2P0DP24 149 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 CALM3P0DP25 149 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 CYBAP13498 195 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 GJA8P48165 433 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 RTN1Q16799 776 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 MAP3K14Q99558 947 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 PDRG1Q9NUG6 133 aa13.89□□□□□ -0.19
NEDD1-202ENST00000411739 DIS3Q9Y2L1 958 aaKnown RBP13.89□□□□□ -0.19
NEDD1-202ENST00000411739 PNMA6FA0A0J9YX94 578 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 CFBP00751 764 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 CCT2P78371 535 aaKnown RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 ZHX1Q9UKY1 873 aaPredicted RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 MYH6P13533 1939 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 PFASO15067 1338 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 ABCB11O95342 1321 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 OPLAHO14841 1288 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 PTGS1P23219 599 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 RRP36Q96EU6 259 aaKnown RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.88□□□□□ -0.19
NEDD1-202ENST00000411739 COL20A1Q9P218 1284 aa13.88□□□□□ -0.19
NEDD1-202ENST00000411739 GNAQP50148 359 aa13.87□□□□□ -0.19
NEDD1-202ENST00000411739 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms