RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 RPTORQ8N122 1335 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 GJB1P08034 283 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 CYBAP13498 195 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 PPP2R5BQ15173 497 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 TCEANC2Q96MN5 208 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 CYP39A1Q9NYL5 469 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
GYPC-203ENST00000409836 ASTN1O14525 1302 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 NFIBO00712 420 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 PPP1R11O60927 126 aaPredicted RBP16.27■□□□□ 0.2
GYPC-203ENST00000409836 ALAS1P13196 640 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 CCL5P13501 91 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
GYPC-203ENST00000409836 SNAP25P60880 206 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 FUT2Q10981 343 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 TRAF1Q13077 416 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 MTFR1Q15390 333 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 NFXL1Q6ZNB6 911 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 DPP9Q86TI2 863 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
GYPC-203ENST00000409836 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.2
GYPC-203ENST00000409836 RBM28Q9NW13 759 aaKnown RBP16.27■□□□□ 0.2
GYPC-203ENST00000409836 CNTNAP5Q8WYK1 1306 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 OPLAHO14841 1288 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 ZBTB43O43298 467 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 SEC24BO95487 1268 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 PGK2P07205 417 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 CPA1P15085 419 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 GJA8P48165 433 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 CACNB2Q08289 660 aaPredicted RBP16.26■□□□□ 0.19
GYPC-203ENST00000409836 TRIM32Q13049 653 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
GYPC-203ENST00000409836 MFSD14CQ5VZR4 134 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 MICU3Q86XE3 530 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 SAMD3Q8N6K7 520 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 MORC4Q8TE76 937 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 SHISA4Q96DD7 197 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 CRISPLD2Q9H0B8 497 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.26■□□□□ 0.19
GYPC-203ENST00000409836 UNC93B1Q9H1C4 597 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 CYP46A1Q9Y6A2 500 aa16.26■□□□□ 0.19
GYPC-203ENST00000409836 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 KLF18A0A0U1RQI7 1052 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 CCDC85CA6NKD9 419 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 TAL1P17542 331 aaPredicted RBP16.25■□□□□ 0.19
GYPC-203ENST00000409836 Q6ZUG5 572 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 NUP133Q8WUM0 1156 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 BRF1Q92994 677 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 TINF2Q9BSI4 451 aa16.25■□□□□ 0.19
GYPC-203ENST00000409836 HMX1Q9NP08 348 aaPredicted RBP16.25■□□□□ 0.19
GYPC-203ENST00000409836 FAM217BQ9NTX9 383 aaPredicted RBP16.25■□□□□ 0.19
GYPC-203ENST00000409836 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
GYPC-203ENST00000409836 PDE4DIPQ5VU43 2346 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 KIAA1217Q5T5P2 1943 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 HSD17B4P51659 736 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 SRBD1Q8N5C6 995 aaKnown RBP16.24■□□□□ 0.19
GYPC-203ENST00000409836 KATNBL1Q9H079 304 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 MRPL11Q9Y3B7 192 aaKnown RBP16.24■□□□□ 0.19
GYPC-203ENST00000409836 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
GYPC-203ENST00000409836 GOLGA8BA8MQT2 603 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 POTEB2H3BUK9 544 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 MSCO60682 206 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 RXRAP19793 462 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 EDNRBP24530 442 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 CYP2C19P33261 490 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
GYPC-203ENST00000409836 RTN1Q16799 776 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 DNERQ8NFT8 737 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 PIGSQ96S52 555 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 UPF3BQ9BZI7 483 aaKnown RBP16.23■□□□□ 0.19
GYPC-203ENST00000409836 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
GYPC-203ENST00000409836 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
GYPC-203ENST00000409836 FRMPD4Q14CM0 1322 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 GOLGA8AA7E2F4 631 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
GYPC-203ENST00000409836 CDC27P30260 824 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 RPS6P62753 249 aaKnown RBP16.22■□□□□ 0.19
GYPC-203ENST00000409836 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 APOBRQ0VD83 1088 aa16.22■□□□□ 0.19
GYPC-203ENST00000409836 USH1GQ495M9 461 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms