RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 AGBL3Q8NEM8 1001 aa22.34■■□□□ 1.17
LIMS2-207ENST00000409808 GSDMAQ96QA5 445 aa22.34■■□□□ 1.17
LIMS2-207ENST00000409808 NPM3O75607 178 aaKnown RBP22.34■■□□□ 1.17
LIMS2-207ENST00000409808 SCG2P13521 617 aa22.34■■□□□ 1.17
LIMS2-207ENST00000409808 TMCO3Q6UWJ1 677 aa22.34■■□□□ 1.17
LIMS2-207ENST00000409808 LRRN4CLQ8ND94 238 aa22.34■■□□□ 1.17
LIMS2-207ENST00000409808 GPKOWQ92917 476 aaPredicted RBP eCLIP22.34■■□□□ 1.17
LIMS2-207ENST00000409808 PYM1Q9BRP8 204 aaKnown RBP22.34■■□□□ 1.17
LIMS2-207ENST00000409808 FAM205CA6NFA0 338 aa22.33■■□□□ 1.17
LIMS2-207ENST00000409808 AKR1B15C9JRZ8 316 aaPredicted RBP22.33■■□□□ 1.17
LIMS2-207ENST00000409808 KLRF2D3W0D1 207 aa22.33■■□□□ 1.17
LIMS2-207ENST00000409808 ADAMTS3O15072 1205 aa22.33■■□□□ 1.17
LIMS2-207ENST00000409808 ENTPD3O75355 529 aa22.33■■□□□ 1.17
LIMS2-207ENST00000409808 PFKFB3Q16875 520 aaPredicted RBP22.33■■□□□ 1.17
LIMS2-207ENST00000409808 TAF3Q5VWG9 929 aa22.33■■□□□ 1.17
LIMS2-207ENST00000409808 VEZTQ9HBM0 779 aa22.33■■□□□ 1.17
LIMS2-207ENST00000409808 SCAF8Q9UPN6 1271 aaKnown RBP22.33■■□□□ 1.17
LIMS2-207ENST00000409808 FRMPD2Q68DX3 1309 aaPredicted RBP22.33■■□□□ 1.16
LIMS2-207ENST00000409808 PARP1P09874 1014 aaKnown RBP22.32■■□□□ 1.16
LIMS2-207ENST00000409808 GNG11P61952 73 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 GOLGA8FQ08AF8 430 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 GOLGA8DPQ0D2H9 430 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 CERKLQ49MI3 558 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-207ENST00000409808 TRIM34Q9BYJ4 488 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 SAMSN1Q9NSI8 373 aaKnown RBP22.32■■□□□ 1.16
LIMS2-207ENST00000409808 GREB1LQ9C091 1923 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-207ENST00000409808 MYH4Q9Y623 1939 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 GDF11O95390 407 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 NBPF9Q3BBW0 867 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
LIMS2-207ENST00000409808 EARS2Q5JPH6 523 aaKnown RBP22.32■■□□□ 1.16
LIMS2-207ENST00000409808 MED15Q96RN5 788 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 CSRNP1Q96S65 589 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 CARD6Q9BX69 1037 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 TMOD2Q9NZR1 351 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 FHOD1Q9Y613 1164 aa22.32■■□□□ 1.16
LIMS2-207ENST00000409808 ZRANB2O95218 330 aaKnown RBP eCLIP22.31■■□□□ 1.16
LIMS2-207ENST00000409808 TTLL1O95922 423 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 ADKP55263 362 aaKnown RBP22.31■■□□□ 1.16
LIMS2-207ENST00000409808 NPY5RQ15761 445 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 CDAN1Q8IWY9 1227 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 GPR161Q8N6U8 529 aaKnown RBP22.31■■□□□ 1.16
LIMS2-207ENST00000409808 DHX58Q96C10 678 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 PAGE5Q96GU1 130 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 UBA5Q9GZZ9 404 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 PDHBP11177 359 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 ATP2B1P20020 1258 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 GNAQP50148 359 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 FILIP1LQ4L180 1135 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 PPFIBP1Q86W92 1011 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 TRMT44Q8IYL2 757 aaKnown RBP22.31■■□□□ 1.16
LIMS2-207ENST00000409808 GRAMD1CQ8IYS0 662 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 VAT1LQ9HCJ6 419 aa22.31■■□□□ 1.16
LIMS2-207ENST00000409808 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 ATRNL1Q5VV63 1379 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 FANCGO15287 622 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 EGFRP00533 1210 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 CCDC175P0C221 793 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 JAG1P78504 1218 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 RRP1BQ14684 758 aaKnown RBP22.3■■□□□ 1.16
LIMS2-207ENST00000409808 SPDYE2Q495Y8 402 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 RBM26Q5T8P6 1007 aaKnown RBP22.3■■□□□ 1.16
LIMS2-207ENST00000409808 USP49Q70CQ1 688 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 CUL4BQ13620 913 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 TATDN1Q6P1N9 297 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 MRFAP1Q9Y605 127 aa22.3■■□□□ 1.16
LIMS2-207ENST00000409808 PNMA6AP0CW24 399 aaPredicted RBP22.29■■□□□ 1.16
LIMS2-207ENST00000409808 CDKAL1Q5VV42 579 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 TYW1BQ6NUM6 668 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 TOGARAM2Q6ZUX3 1019 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 CCDC51Q96ER9 411 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 CCDC17Q96LX7 622 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 WNT10BO00744 389 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 TRAPPC10P48553 1259 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 NLRP5P59047 1200 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 DPYDQ12882 1025 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 TUBB2AQ13885 445 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 SEPT2Q15019 361 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 HSP90AA4PQ58FG1 418 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 APTXQ7Z2E3 356 aaKnown RBP22.29■■□□□ 1.16
LIMS2-207ENST00000409808 TUBB2BQ9BVA1 445 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 TMEM39BQ9GZU3 492 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 MYOZ2Q9NPC6 264 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 GJA3Q9Y6H8 435 aa22.29■■□□□ 1.16
LIMS2-207ENST00000409808 SYNRGQ9UMZ2 1314 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 PBX1P40424 430 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 TNIP1Q15025 636 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 SYMPKQ92797 1274 aaKnown RBP22.28■■□□□ 1.16
LIMS2-207ENST00000409808 KIFC2Q96AC6 838 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 ADD3Q9UEY8 706 aaKnown RBP22.28■■□□□ 1.16
LIMS2-207ENST00000409808 TUBB4BP68371 445 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 WWC2Q6AWC2 1192 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 TNFRSF25Q93038 417 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 EPSTI1Q96J88 318 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 WDR24Q96S15 920 aa22.28■■□□□ 1.16
LIMS2-207ENST00000409808 ARFGEF1Q9Y6D6 1849 aa22.27■■□□□ 1.16
LIMS2-207ENST00000409808 EEF2P13639 858 aaKnown RBP22.27■■□□□ 1.16
LIMS2-207ENST00000409808 PPP2R3AQ06190 1150 aa22.27■■□□□ 1.16
LIMS2-207ENST00000409808 PTPN21Q16825 1174 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms