RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 MROH8Q9H579 483 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 SMCHD1A6NHR9 2005 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 NFIBO00712 420 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 CDKL5O76039 1030 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 COPB2P35606 906 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 FCGRTP55899 365 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 GPR142Q7Z601 462 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 PLEKHH3Q7Z736 793 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 TRIM22Q8IYM9 498 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 NSUN7Q8NE18 718 aaKnown RBP17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 MYH6P13533 1939 aa17.49■□□□□ 0.39
SNRNP27-202ENST00000409116 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 SCG2P13521 617 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 PKN1Q16512 942 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 TKFCQ3LXA3 575 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 WWC2Q6AWC2 1192 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 CHST13Q8NET6 341 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 CLEC4DQ8WXI8 215 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 ACAD9Q9H845 621 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 IVNS1ABPQ9Y6Y0 642 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 ABCB11O95342 1321 aa17.48■□□□□ 0.39
SNRNP27-202ENST00000409116 PFKFB3Q16875 520 aaPredicted RBP17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 SNX21Q969T3 373 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 MMP19Q99542 508 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 ORC3Q9UBD5 711 aaPredicted RBP17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 MRPL11Q9Y3B7 192 aaKnown RBP17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 CASP8AP2Q9UKL3 1982 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 MGAMO43451 1857 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 K7ELQ4 463 aaPredicted RBP17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 STXBP3O00186 592 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 OPLAHO14841 1288 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 FCER1AP12319 257 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 PTPREP23469 700 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 TYW1BQ6NUM6 668 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 NSMFQ6X4W1 530 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 A1CFQ9NQ94 594 aaKnown RBP17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 GABRQQ9UN88 632 aa17.47■□□□□ 0.39
SNRNP27-202ENST00000409116 STK36Q9NRP7 1315 aa17.46■□□□□ 0.39
SNRNP27-202ENST00000409116 DEXIO95424 95 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 ADORA2AP29274 412 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 NAPAP54920 295 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 PRKCZQ05513 592 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 TRAF1Q13077 416 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 GRB14Q14449 540 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 MORN1Q5T089 497 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 OTOP1Q7RTM1 612 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 ANKRD35Q8N283 1001 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 TBC1D5Q92609 795 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 LLPHQ9BRT6 129 aaKnown RBP17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 BARHL2Q9NY43 387 aa17.46■□□□□ 0.38
SNRNP27-202ENST00000409116 SLC15A5A6NIM6 579 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 STRNO43815 780 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 PGK2P07205 417 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 FDPSP14324 419 aaKnown RBP17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 BAATQ14032 418 aaPredicted RBP17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 KCTD2Q14681 263 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 SLC30A10Q6XR72 485 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 ABRAQ8N0Z2 381 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 GJD2Q9UKL4 321 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 TRIM17Q9Y577 477 aa17.45■□□□□ 0.38
SNRNP27-202ENST00000409116 CFBP00751 764 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 FOSBP53539 338 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 CUL4AQ13619 759 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 ARHGEF6Q15052 776 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 SOCS4Q8WXH5 440 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 PURBQ96QR8 312 aaKnown RBP17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 SRRDQ9UH36 339 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 CENPFP49454 3210 aa17.44■□□□□ 0.38
SNRNP27-202ENST00000409116 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 hCG_1984214I3L0E3 225 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 COBLO75128 1261 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 CYP2B6P20813 491 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 CALML3P27482 149 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 HOXA13P31271 388 aaPredicted RBP17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 FLT3LGP49771 235 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 RPS6P62753 249 aaKnown RBP17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 MAP2K5Q13163 448 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 PPP1R18Q6NYC8 613 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 MCF2L2Q86YR7 1114 aa17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 ZNF713Q8N859 430 aaPredicted RBP17.43■□□□□ 0.38
SNRNP27-202ENST00000409116 USP6NLQ92738 828 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms