RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
RPAIN-204ENST00000405578 LRRC2Q9BYS8 371 aa12.29□□□□□ -0.44
RPAIN-204ENST00000405578 UPF3BQ9BZI7 483 aaKnown RBP12.29□□□□□ -0.44
RPAIN-204ENST00000405578 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
RPAIN-204ENST00000405578 PDRG1Q9NUG6 133 aa12.29□□□□□ -0.44
RPAIN-204ENST00000405578 FEM1BQ9UK73 627 aa12.29□□□□□ -0.44
RPAIN-204ENST00000405578 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-204ENST00000405578 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 DDAH1O94760 285 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 PARP1P09874 1014 aaKnown RBP12.28□□□□□ -0.44
RPAIN-204ENST00000405578 PDHBP11177 359 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 KIF5BP33176 963 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 STAT2P52630 851 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 ASPRV1Q53RT3 343 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 Q6ZUG5 572 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 FAM160B2Q86V87 743 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 SGMS1Q86VZ5 419 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 TRPV1Q8NER1 839 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-204ENST00000405578 ADAMTS19Q8TE59 1207 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
RPAIN-204ENST00000405578 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-204ENST00000405578 ZNFX1Q9P2E3 1918 aaKnown RBP12.27□□□□□ -0.44
RPAIN-204ENST00000405578 TRIM43BA6NCK2 446 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 TMEM232C9JQI7 657 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 KBTBD13C9JR72 458 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 MYCNP04198 464 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-204ENST00000405578 FDX1P10109 184 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 CPA1P15085 419 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 DNAJB2P25686 324 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 CYP2C19P33261 490 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 NEK4P51957 841 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 EPHB4P54760 987 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-204ENST00000405578 SNX17Q15036 470 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 RABEP1Q15276 862 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 ANO1Q5XXA6 986 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-204ENST00000405578 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 PRPF38AQ8NAV1 312 aaKnown RBP12.27□□□□□ -0.45
RPAIN-204ENST00000405578 BRF1Q92994 677 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 TRIM43Q96BQ3 446 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-204ENST00000405578 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 TBC1D32Q96NH3 1257 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 MAP3K14Q99558 947 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 NUP88Q99567 741 aaPredicted RBP12.27□□□□□ -0.45
RPAIN-204ENST00000405578 THEGQ9P2T0 379 aa12.27□□□□□ -0.45
RPAIN-204ENST00000405578 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 CCDC196A0A1B0GTZ2 297 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 SLC15A5A6NIM6 579 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 ZBTB43O43298 467 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 ST18O60284 1047 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 PLA2G6O60733 806 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 ZBED4O75132 1171 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 SNHG28P0DPA3 235 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 CYBAP13498 195 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 PTPREP23469 700 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 GNAQP50148 359 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 RCAN1P53805 252 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 CCNA1P78396 465 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 ZNF543Q08ER8 600 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 KIAA1755Q5JYT7 1200 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 KCTD1Q719H9 257 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 ARRDC4Q8NCT1 418 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 NPLOC4Q8TAT6 608 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
RPAIN-204ENST00000405578 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 UHRF1Q96T88 793 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-204ENST00000405578 LZTS2Q9BRK4 669 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 GPCPD1Q9NPB8 672 aa12.26□□□□□ -0.45
RPAIN-204ENST00000405578 GOLGA8BA8MQT2 603 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
RPAIN-204ENST00000405578 CNMDO75829 334 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 ITGB8P26012 769 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 DSG3P32926 999 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 TROAPQ12815 778 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 APOA5Q6Q788 366 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 ASB2Q96Q27 587 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 AGXT2Q9BYV1 514 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-204ENST00000405578 ZNF576Q9H609 170 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 GPHNQ9NQX3 736 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-204ENST00000405578 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
RPAIN-204ENST00000405578 PNMA2Q9UL42 364 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 PPP1R9AQ9ULJ8 1098 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 IVNS1ABPQ9Y6Y0 642 aa12.25□□□□□ -0.45
RPAIN-204ENST00000405578 FRMPD2Q68DX3 1309 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-204ENST00000405578 A0A0G2JMZ2 1700 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms