RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 KCNMB3Q9NPA1 279 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 UTYO14607 1347 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 LRRD1A4D1F6 860 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 ODF2Q5BJF6 829 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 ANKRD20A2Q5SQ80 823 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 ANKRD20A1Q5TYW2 823 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 ANKRD20A3Q5VUR7 823 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 TXNDC2Q86VQ3 553 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 NCAPG2Q86XI2 1143 aa18.36■□□□□ 0.53
NPRL3-201ENST00000399953 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
NPRL3-201ENST00000399953 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 ESYT3A0FGR9 886 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 KSR2Q6VAB6 950 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 MB21D2Q8IYB1 491 aaPredicted RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 NHEJ1Q9H9Q4 299 aaPredicted RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 ZNHIT6Q9NWK9 470 aaKnown RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 EHD2Q9NZN4 543 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 DPPA5A6NC42 116 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 PPARDQ03181 441 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 DPYDQ12882 1025 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 IFI16Q16666 785 aaKnown RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 RBM12BQ8IXT5 1001 aaKnown RBP18.35■□□□□ 0.53
NPRL3-201ENST00000399953 CAPN6Q9Y6Q1 641 aa18.35■□□□□ 0.53
NPRL3-201ENST00000399953 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 F8W031 263 aaPredicted RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 USO1O60763 962 aaKnown RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 CCNG1P51959 295 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 MXRA7P84157 204 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 NOSTRINQ8IVI9 506 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 TEKT4Q8WW24 435 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 SUDS3Q9H7L9 328 aaPredicted RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 SRPRBQ9Y5M8 271 aaKnown RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 ECM29Q5VYK3 1845 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 A0A1W2PQC6 194 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 ABLIM1O14639 778 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 COBLO75128 1261 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 CXCR5P32302 372 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 CUL3Q13618 768 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 SEPT2Q15019 361 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 LRRC23Q53EV4 343 aaPredicted RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 MB21D1Q8N884 522 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 CHMP6Q96FZ7 201 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 RBM41Q96IZ5 413 aaKnown RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 RWDD2AQ9UIY3 292 aa18.34■□□□□ 0.53
NPRL3-201ENST00000399953 IQSEC3Q9UPP2 1182 aaPredicted RBP18.34■□□□□ 0.53
NPRL3-201ENST00000399953 GOLGA6L10A0A0M3HER8 536 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.53
NPRL3-201ENST00000399953 FAM163BP0C2L3 166 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 NQO1P15559 274 aaKnown RBP18.33■□□□□ 0.53
NPRL3-201ENST00000399953 CNGA1P29973 690 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 ITIH4Q14624 930 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 TAF11Q15544 211 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 AGBL2Q5U5Z8 902 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 ANKRD23Q86SG2 305 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 PAGE5Q96GU1 130 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 NAF1Q96HR8 494 aaKnown RBP18.33■□□□□ 0.53
NPRL3-201ENST00000399953 PSMB7Q99436 277 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 DBNDD2Q9BQY9 259 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 ANKIB1Q9P2G1 1089 aa18.33■□□□□ 0.53
NPRL3-201ENST00000399953 G3BP2Q9UN86 482 aaKnown RBP18.33■□□□□ 0.53
NPRL3-201ENST00000399953 USP31Q70CQ4 1352 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 EVI5O60447 810 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 NPTXRO95502 500 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
NPRL3-201ENST00000399953 CYP27A1Q02318 531 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 CCDC96Q2M329 555 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 USP49Q70CQ1 688 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 SH3RF1Q7Z6J0 888 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 SDCCAG8Q86SQ7 713 aaPredicted RBP18.33■□□□□ 0.52
NPRL3-201ENST00000399953 LINS1Q8NG48 757 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 CASKIN2Q8WXE0 1202 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 CNOT8Q9UFF9 292 aaKnown RBP18.33■□□□□ 0.52
NPRL3-201ENST00000399953 MAST3O60307 1309 aa18.33■□□□□ 0.52
NPRL3-201ENST00000399953 MYH10P35580 1976 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 FLT4P35916 1363 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 CASP1P29466 404 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
NPRL3-201ENST00000399953 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.525e-7■■□□□ 11.7
NPRL3-201ENST00000399953 TOB1P50616 345 aaPredicted RBP18.32■□□□□ 0.52
NPRL3-201ENST00000399953 ANTXR2P58335 489 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 TFCP2Q12800 502 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 PPP1R15BQ5SWA1 713 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 CACNA2D4Q7Z3S7 1137 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 LRWD1Q9UFC0 647 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 MYH13Q9UKX3 1938 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 SPA17Q15506 151 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 CFAP221Q4G0U5 840 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 ERICH1Q86X53 443 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 PHKBQ93100 1093 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 CSRNP2Q9H175 543 aa18.32■□□□□ 0.52
NPRL3-201ENST00000399953 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms