RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ANKRD1Q15327 319 aa29.42■■■□□ 2.3
TMEM55B-202ENST00000398020 TKFCQ3LXA3 575 aa29.42■■■□□ 2.3
TMEM55B-202ENST00000398020 USP6NLQ92738 828 aa29.42■■■□□ 2.3
TMEM55B-202ENST00000398020 ZNF274Q96GC6 653 aaPredicted RBP29.42■■■□□ 2.3
TMEM55B-202ENST00000398020 FBXO40Q9UH90 709 aa29.42■■■□□ 2.3
TMEM55B-202ENST00000398020 SMARCA1P28370 1054 aa29.41■■■□□ 2.3
TMEM55B-202ENST00000398020 ANKRD35Q8N283 1001 aa29.41■■■□□ 2.3
TMEM55B-202ENST00000398020 RRP36Q96EU6 259 aaKnown RBP29.41■■■□□ 2.3
TMEM55B-202ENST00000398020 NID2Q14112 1375 aa29.41■■■□□ 2.3
TMEM55B-202ENST00000398020 NFIBO00712 420 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 DPP9Q86TI2 863 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 AMNQ9BXJ7 453 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 CNTNAP5Q8WYK1 1306 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 ZNFX1Q9P2E3 1918 aaKnown RBP29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 PNMA6FA0A0J9YX94 578 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 COBLO75128 1261 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 PPFIA3O75145 1194 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 ELNP15502 786 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 RGS2P41220 211 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 FUT2Q10981 343 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 ABRAQ8N0Z2 381 aa29.4■■■□□ 2.3
TMEM55B-202ENST00000398020 CCDC196A0A1B0GTZ2 297 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 IRF5Q13568 498 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 NSMFQ6X4W1 530 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 CLEC4DQ8WXI8 215 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 DDX11Q96FC9 970 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 A1CFQ9NQ94 594 aaKnown RBP29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 SEC63Q9UGP8 760 aaKnown RBP29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 PNMA2Q9UL42 364 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 PCDHA1Q9Y5I3 950 aa29.39■■■□□ 2.3
TMEM55B-202ENST00000398020 ZNF236Q9UL36 1845 aa29.39■■■□□ 2.29
TMEM55B-202ENST00000398020 ADCY3O60266 1144 aa29.38■■■□□ 2.29
TMEM55B-202ENST00000398020 PPP2R5BQ15173 497 aa29.38■■■□□ 2.29
TMEM55B-202ENST00000398020 RABEP1Q15276 862 aa29.38■■■□□ 2.29
TMEM55B-202ENST00000398020 NPLOC4Q8TAT6 608 aa29.38■■■□□ 2.29
TMEM55B-202ENST00000398020 SH3TC2Q8TF17 1288 aa29.38■■■□□ 2.29
TMEM55B-202ENST00000398020 CCL14Q16627 93 aa29.37■■■□□ 2.29
TMEM55B-202ENST00000398020 APBA2Q99767 749 aa29.37■■■□□ 2.29
TMEM55B-202ENST00000398020 ABCB11O95342 1321 aa29.37■■■□□ 2.29
TMEM55B-202ENST00000398020 LARGE1O95461 756 aa29.37■■■□□ 2.29
TMEM55B-202ENST00000398020 V9GY48 417 aaPredicted RBP29.37■■■□□ 2.29
TMEM55B-202ENST00000398020 GRK4P32298 578 aa29.36■■■□□ 2.29
TMEM55B-202ENST00000398020 SLC9C1Q4G0N8 1177 aa29.36■■■□□ 2.29
TMEM55B-202ENST00000398020 PHKBQ93100 1093 aa29.36■■■□□ 2.29
TMEM55B-202ENST00000398020 SLKQ9H2G2 1235 aaPredicted RBP29.36■■■□□ 2.29
TMEM55B-202ENST00000398020 SCRN1Q12765 414 aa29.35■■■□□ 2.29
TMEM55B-202ENST00000398020 ME3Q16798 604 aa29.35■■■□□ 2.29
TMEM55B-202ENST00000398020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.35■■■□□ 2.29
TMEM55B-202ENST00000398020 TNS4Q8IZW8 715 aa29.35■■■□□ 2.29
TMEM55B-202ENST00000398020 TRIB2Q92519 343 aa29.35■■■□□ 2.29
TMEM55B-202ENST00000398020 XRCC5P13010 732 aaKnown RBP29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 NTRK3Q16288 839 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 CYP39A1Q9NYL5 469 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 FLRT1Q9NZU1 646 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 PTPDC1A2A3K4 754 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 DTNBO60941 627 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 HOXC6P09630 235 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 CNTN2Q02246 1040 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 SLC30A10Q6XR72 485 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 NECAB1Q8N987 351 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 SLAIN1Q8ND83 568 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 TBC1D5Q92609 795 aa29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 GPKOWQ92917 476 aaPredicted RBP eCLIP29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 BIN2Q9UBW5 565 aaPredicted RBP29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 MRPL11Q9Y3B7 192 aaKnown RBP29.34■■■□□ 2.29
TMEM55B-202ENST00000398020 PLXNA1Q9UIW2 1896 aa29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 DNAJC25-GNG10A0A024R161 153 aa29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 PFKFB2O60825 505 aa29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 BAATQ14032 418 aaPredicted RBP29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 PXYLP1Q8TE99 480 aa29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 PURBQ96QR8 312 aaKnown RBP29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 PFASO15067 1338 aa29.33■■■□□ 2.29
TMEM55B-202ENST00000398020 CPLX1O14810 134 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 OPLAHO14841 1288 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 MYCP01106 439 aaPredicted RBP29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 TRIM32Q13049 653 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 ZNF792Q3KQV3 632 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 RNF207Q6ZRF8 634 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 HEATR3Q7Z4Q2 680 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 SLC5A4Q9NY91 659 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 BRCA2P51587 3418 aa29.32■■■□□ 2.28
TMEM55B-202ENST00000398020 POTEB2H3BUK9 544 aa29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 IFNAR1P17181 557 aa29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 CALML3P27482 149 aa29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 MAML3Q96JK9 1138 aa29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 SLC26A6Q9BXS9 759 aa29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 LIMCH1Q9UPQ0 1083 aa29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 RPS6P62753 249 aaKnown RBP29.31■■■□□ 2.28
TMEM55B-202ENST00000398020 ST18O60284 1047 aa29.3■■■□□ 2.28
TMEM55B-202ENST00000398020 TRAF1Q13077 416 aa29.3■■■□□ 2.28
TMEM55B-202ENST00000398020 RBBP6Q7Z6E9 1792 aaKnown RBP29.3■■■□□ 2.28
TMEM55B-202ENST00000398020 CD2BP2O95400 341 aaKnown RBP29.29■■■□□ 2.28
TMEM55B-202ENST00000398020 CFBP00751 764 aa29.29■■■□□ 2.28
TMEM55B-202ENST00000398020 WWC2Q6AWC2 1192 aa29.29■■■□□ 2.28
TMEM55B-202ENST00000398020 FAM133AQ8N9E0 248 aa29.29■■■□□ 2.28
TMEM55B-202ENST00000398020 FGD4Q96M96 766 aa29.29■■■□□ 2.28
TMEM55B-202ENST00000398020 LCTP09848 1927 aa29.29■■■□□ 2.28
TMEM55B-202ENST00000398020 HMGCRP04035 888 aa29.28■■■□□ 2.28
TMEM55B-202ENST00000398020 INHAP05111 366 aa29.28■■■□□ 2.28
TMEM55B-202ENST00000398020 CYP2C19P33261 490 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms