RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 MCM3APO60318 1980 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 CDC45O75419 566 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 EVCP57679 992 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 TROAPQ12815 778 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 TRIM32Q13049 653 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 SART3Q15020 963 aaKnown RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 XRRA1Q6P2D8 792 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 RNF146Q9NTX7 359 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 STX8Q9UNK0 236 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 RIPK3Q9Y572 518 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 KPNA6O60684 536 aa7.71□□□□□ -1.17
LMO3-205ENST00000396205 TFRCP02786 760 aaKnown RBP7.71□□□□□ -1.17
LMO3-205ENST00000396205 TRDNQ13061 729 aa7.71□□□□□ -1.17
LMO3-205ENST00000396205 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.17
LMO3-205ENST00000396205 TRERF1Q96PN7 1200 aa7.71□□□□□ -1.17
LMO3-205ENST00000396205 CWC22Q9HCG8 908 aaKnown RBP7.71□□□□□ -1.17
LMO3-205ENST00000396205 NMT2O60551 498 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 KDM4AO75164 1064 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 GNAQP50148 359 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 RNF20Q5VTR2 975 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 SESTD1Q86VW0 696 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 NUP88Q99567 741 aaPredicted RBP7.71□□□□□ -1.18
LMO3-205ENST00000396205 GDF15Q99988 308 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 ALDH8A1Q9H2A2 487 aaPredicted RBP7.71□□□□□ -1.18
LMO3-205ENST00000396205 ASTN1O14525 1302 aa7.71□□□□□ -1.18
LMO3-205ENST00000396205 CTAGE5O15320 804 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 PARP1P09874 1014 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 RARBP10826 455 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 PTH1RQ03431 593 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 ACVR2BQ13705 512 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 PCSK9Q8NBP7 692 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 KIFC2Q96AC6 838 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 UBAC1Q9BSL1 405 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 BIN2Q9UBW5 565 aaPredicted RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 CNPY2Q9Y2B0 182 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 SYNRGQ9UMZ2 1314 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 SOWAHBA6NEL2 793 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 SH2B2O14492 632 aaPredicted RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 MCCP23508 829 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 CDK7P50613 346 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 ANTXR2P58335 489 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 RBL2Q08999 1139 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 LRRC41Q15345 812 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 IFIT1BQ5T764 474 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 KCNV1Q6PIU1 500 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 CYB5R4Q7L1T6 521 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 ARMCX2Q7L311 632 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 RNF180Q86T96 592 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 LY9Q9HBG7 655 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 RAVER2Q9HCJ3 691 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 PCDH10Q9P2E7 1040 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 MRPL11Q9Y3B7 192 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 RBM8AQ9Y5S9 174 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 KBTBD13C9JR72 458 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 ZBTB5O15062 677 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 KIAA0355O15063 1070 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 ALDH5A1P51649 535 aaPredicted RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 EXOSC10Q01780 885 aaKnown RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 TAPT1Q6NXT6 567 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 STOX1Q6ZVD7 989 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 CCPG1Q9ULG6 757 aa7.7□□□□□ -1.18
LMO3-205ENST00000396205 CTDP1Q9Y5B0 961 aaPredicted RBP7.7□□□□□ -1.18
LMO3-205ENST00000396205 B4E1Z4 1266 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 SLC27A2O14975 620 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 MCM5P33992 734 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 MCTP2Q6DN12 878 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
LMO3-205ENST00000396205 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 POTEB2H3BUK9 544 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 KIF5BP33176 963 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 LRIT3Q3SXY7 679 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 FAM109BQ6ICB4 259 aaPredicted RBP7.69□□□□□ -1.18
LMO3-205ENST00000396205 SLC39A5Q6ZMH5 540 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 KCTD1Q719H9 257 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 ADGRF4Q8IZF3 695 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 ANKRD35Q8N283 1001 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 TM6SF1Q9BZW5 370 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 JMJD4Q9H9V9 463 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 SMCHD1A6NHR9 2005 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 ERICH2A1L162 156 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 PEX10O60683 326 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 HSPA4P34932 840 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 CDC37Q16543 378 aaPredicted RBP7.69□□□□□ -1.18
LMO3-205ENST00000396205 DUSP28Q4G0W2 176 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 CREB3L3Q68CJ9 461 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 PAWRQ96IZ0 340 aaKnown RBP7.69□□□□□ -1.18
LMO3-205ENST00000396205 AGBL1Q96MI9 1066 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 AMNQ9BXJ7 453 aa7.69□□□□□ -1.18
LMO3-205ENST00000396205 ICAM3P32942 547 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 CYP2C19P33261 490 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 PLS1Q14651 629 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 WTAPQ15007 396 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 MUM1L1Q5H9M0 696 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 KIAA1211Q6ZU35 1233 aa7.68□□□□□ -1.18
LMO3-205ENST00000396205 RALYLQ86SE5 291 aaKnown RBP7.68□□□□□ -1.18
LMO3-205ENST00000396205 NUP133Q8WUM0 1156 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms