RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 CCDC51Q96ER9 411 aa16.33■□□□□ 0.21
PPP1CB-203ENST00000395366 PAGE5Q96GU1 130 aa16.33■□□□□ 0.21
PPP1CB-203ENST00000395366 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 KIAA1024Q9UPX6 916 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 DNM2P50570 870 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 UBE2SQ16763 222 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 FAM26FQ5R3K3 315 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 PLA2G4DQ86XP0 818 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 GPIHBP1Q8IV16 184 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 ENOX1Q8TC92 643 aaKnown RBP16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 PANK4Q9NVE7 773 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 KLRK1P26718 216 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 CYP4A11Q02928 519 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 OR8K1Q8NGG5 319 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 NEDD1Q8NHV4 660 aa16.33■□□□□ 0.2
PPP1CB-203ENST00000395366 FAM196BA6NMK8 535 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 TERF1P54274 439 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 TSGA10Q9BZW7 698 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 FLOT1O75955 427 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 EVCP57679 992 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 VWA3BQ502W6 1294 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 LMBR1Q8WVP7 490 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 CTNNBL1Q8WYA6 563 aaPredicted RBP16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 DESI2Q9BSY9 194 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
PPP1CB-203ENST00000395366 AOC3Q16853 763 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 ATP1A3P13637 1013 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 PPP2R3AQ06190 1150 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 PTPN21Q16825 1174 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 MIER3Q7Z3K6 550 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 SELENOOQ9BVL4 669 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 CARD6Q9BX69 1037 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 HPS5Q9UPZ3 1129 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 IGSF3O75054 1194 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 GH2P01242 217 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 COPB1P53618 953 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 SLC9C1Q4G0N8 1177 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 ZNF658Q5TYW1 1059 aaPredicted RBP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 STAG2Q8N3U4 1231 aa16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
PPP1CB-203ENST00000395366 EXOC3O60645 756 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 RHOXF2BP0C7M4 288 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 TUBB4BP68371 445 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 SHC4Q6S5L8 630 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 RHOXF2Q9BQY4 288 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 PLCG1P19174 1290 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 STAT2P52630 851 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 MCM6Q14566 821 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 KIAA1524Q8TCG1 905 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■■■□ 22
PPP1CB-203ENST00000395366 DAGLAQ9Y4D2 1042 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 SLIT3O75094 1523 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.25e-7■■□□□ 14.2
PPP1CB-203ENST00000395366 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 RGPD8O14715 1765 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 MYL1P05976 194 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 KRT222Q8N1A0 295 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 DISC1Q9NRI5 854 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 SUGT1Q9Y2Z0 365 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
PPP1CB-203ENST00000395366 MAGEA1P43355 309 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 GNA14O95837 355 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 UBXN2AP68543 259 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 FMNL3Q8IVF7 1028 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 PDLIM2Q96JY6 352 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 PPP2R2CQ9Y2T4 447 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 ASIC2Q16515 512 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 IFT74Q96LB3 600 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 BARHL2Q9NY43 387 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
PPP1CB-203ENST00000395366 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.27e-17■■□□□ 12.1
PPP1CB-203ENST00000395366 SEPT2Q15019 361 aa16.28■□□□□ 0.2
PPP1CB-203ENST00000395366 CCDC94Q9BW85 323 aaPredicted RBP16.28■□□□□ 0.2
PPP1CB-203ENST00000395366 DNAI2Q9GZS0 605 aa16.28■□□□□ 0.2
PPP1CB-203ENST00000395366 PRM3Q9NNZ6 103 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms