RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 BRPF3Q9ULD4 1205 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 SMCHD1A6NHR9 2005 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 PFASO15067 1338 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 DNAJC25-GNG10A0A024R161 153 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 KLF18A0A0U1RQI7 1052 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 POTEB2H3BUK9 544 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 ZBTB5O15062 677 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 TAL1P17542 331 aaPredicted RBP22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 CACNB2Q08289 660 aaPredicted RBP22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 TRAF1Q13077 416 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 NSMFQ6X4W1 530 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 RAB11FIP4Q86YS3 637 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 BRF1Q92994 677 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 AMNQ9BXJ7 453 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 A1CFQ9NQ94 594 aaKnown RBP22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 NAP1L2Q9ULW6 460 aaPredicted RBP22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 ABCB11O95342 1321 aa22.06■■□□□ 1.12
PDLIM7-204ENST00000393546 CYTH3O43739 400 aa22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 PRKAR2AP13861 404 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 CYP2C19P33261 490 aa22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 MAP3K21Q5TCX8 1036 aa22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 HOMER1Q86YM7 354 aa22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 PIGSQ96S52 555 aa22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 SPZ1Q9BXG8 430 aa22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 RBM28Q9NW13 759 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 MRPL11Q9Y3B7 192 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 BAZ2BQ9UIF8 2168 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-204ENST00000393546 MYH6P13533 1939 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 PNMA6FA0A0J9YX94 578 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 APOBRQ0VD83 1088 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 SLC35G1Q2M3R5 365 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 CLEC4DQ8WXI8 215 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 AGXT2Q9BYV1 514 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 CYP39A1Q9NYL5 469 aa22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 KIAA0100Q14667 2235 aaKnown RBP22.04■■□□□ 1.12
PDLIM7-204ENST00000393546 PLXNA1Q9UIW2 1896 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 NFIBO00712 420 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 IGHA2P01877 340 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 GJB1P08034 283 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 RCAN1P53805 252 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 RTN1Q16799 776 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 ZNF467Q7Z7K2 595 aaPredicted RBP22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 SRBD1Q8N5C6 995 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 MSL3Q8N5Y2 521 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 RGS22Q8NE09 1264 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 RRP36Q96EU6 259 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 TINF2Q9BSI4 451 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 UPF3BQ9BZI7 483 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 MAF1Q9H063 256 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.03■■□□□ 1.128e-9■■■■□ 19.6
PDLIM7-204ENST00000393546 PDRG1Q9NUG6 133 aa22.03■■□□□ 1.12
PDLIM7-204ENST00000393546 PTPDC1A2A3K4 754 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 POTEFA5A3E0 1075 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 GOLGA8AA7E2F4 631 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 GOLGA8BA8MQT2 603 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 PLEKHA8P1O95397 391 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 CNTN2Q02246 1040 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 BAATQ14032 418 aaPredicted RBP22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 PPP2R5BQ15173 497 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 TMTC3Q6ZXV5 915 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 MCF2L2Q86YR7 1114 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 FAM133AQ8N9E0 248 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 PIBF1Q8WXW3 757 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 PCDHA1Q9Y5I3 950 aa22.02■■□□□ 1.12
PDLIM7-204ENST00000393546 RNF207Q6ZRF8 634 aa22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 CMTR1Q8N1G2 835 aaKnown RBP22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 CCDC82Q8N4S0 544 aa22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 DEFB118Q96PH6 123 aa22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 PAK6Q9NQU5 681 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 SEC63Q9UGP8 760 aaKnown RBP22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 CENPFP49454 3210 aa22.01■■□□□ 1.11
PDLIM7-204ENST00000393546 CCDC196A0A1B0GTZ2 297 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 PPP1R11O60927 126 aaPredicted RBP22■■□□□ 1.11
PDLIM7-204ENST00000393546 SGPL1O95470 568 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 CAPN2P17655 700 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 CNGA1P29973 690 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 CCND3P30281 292 aaPredicted RBP22■■□□□ 1.11
PDLIM7-204ENST00000393546 METAP2P50579 478 aaKnown RBP eCLIP22■■□□□ 1.11
PDLIM7-204ENST00000393546 MAMDC4Q6UXC1 1216 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 IL17RAQ96F46 866 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 NRBP1Q9UHY1 535 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 SYNGAP1Q96PV0 1343 aa22■■□□□ 1.11
PDLIM7-204ENST00000393546 SOWAHBA6NEL2 793 aa21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 EN2P19622 333 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 CALML3P27482 149 aa21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 GJA8P48165 433 aa21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 RPS6P62753 249 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 TOB2Q14106 344 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 U2AF1L4Q8WU68 220 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 ADD3Q9UEY8 706 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 CNPY2Q9Y2B0 182 aa21.99■■□□□ 1.11
PDLIM7-204ENST00000393546 ASB14A6NK59 587 aa21.98■■□□□ 1.11
PDLIM7-204ENST00000393546 TFRCP02786 760 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-204ENST00000393546 CYBAP13498 195 aa21.98■■□□□ 1.11
PDLIM7-204ENST00000393546 EVCP57679 992 aa21.98■■□□□ 1.11
PDLIM7-204ENST00000393546 PRAMEF19Q5SWL8 479 aa21.98■■□□□ 1.11
PDLIM7-204ENST00000393546 FGD4Q96M96 766 aa21.98■■□□□ 1.11
PDLIM7-204ENST00000393546 PDIA3P30101 505 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 CDC27P30260 824 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms