RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ABCB11O95342 1321 aa17.46■□□□□ 0.38
IGHV3-53-201ENST00000390627 DNAJC25-GNG10A0A024R161 153 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 CYTH3O43739 400 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 TAL1P17542 331 aaPredicted RBP17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 APOBRQ0VD83 1088 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 PPP2R5BQ15173 497 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 RTN1Q16799 776 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 MUM1L1Q5H9M0 696 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 MAML3Q96JK9 1138 aa17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 ZNFX1Q9P2E3 1918 aaKnown RBP17.45■□□□□ 0.38
IGHV3-53-201ENST00000390627 GOLGA8AA7E2F4 631 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 GOLGA8BA8MQT2 603 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 POTEB2H3BUK9 544 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 CCL5P13501 91 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 MTFR1Q15390 333 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 SLC35G1Q2M3R5 365 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 NSMFQ6X4W1 530 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 TMTC3Q6ZXV5 915 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 PIGSQ96S52 555 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 MAF1Q9H063 256 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 PDRG1Q9NUG6 133 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 CYP39A1Q9NYL5 469 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 FLRT1Q9NZU1 646 aa17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 SEC63Q9UGP8 760 aaKnown RBP17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 MRPL11Q9Y3B7 192 aaKnown RBP17.44■□□□□ 0.38
IGHV3-53-201ENST00000390627 MYH6P13533 1939 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 CCDC196A0A1B0GTZ2 297 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 NFIBO00712 420 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 METAP2P50579 478 aaKnown RBP eCLIP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 TRIM32Q13049 653 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 MAP3K21Q5TCX8 1036 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 CLEC4DQ8WXI8 215 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 RNF208Q9H0X6 261 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 HMX1Q9NP08 348 aaPredicted RBP17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 RPTORQ8N122 1335 aa17.43■□□□□ 0.38
IGHV3-53-201ENST00000390627 NID2Q14112 1375 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 PLXNA1Q9UIW2 1896 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 CAPN15O75808 1086 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 CACNB2Q08289 660 aaPredicted RBP17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 MCF2L2Q86YR7 1114 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 CENPFP49454 3210 aa17.42■□□□□ 0.38
IGHV3-53-201ENST00000390627 PTPDC1A2A3K4 754 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 IGHA2P01877 340 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 CYP2C19P33261 490 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 SOX10P56693 466 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 EVCP57679 992 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 BAATQ14032 418 aaPredicted RBP17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 RNF207Q6ZRF8 634 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 PCDHA1Q9Y5I3 950 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 SYNGAP1Q96PV0 1343 aa17.41■□□□□ 0.38
IGHV3-53-201ENST00000390627 BAZ2BQ9UIF8 2168 aaKnown RBP17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 PPP1R11O60927 126 aaPredicted RBP17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 GJB1P08034 283 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 CNTN2Q02246 1040 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 MAMDC4Q6UXC1 1216 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 SLC30A10Q6XR72 485 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 CMTR1Q8N1G2 835 aaKnown RBP17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 PAK6Q9NQU5 681 aaPredicted RBP17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 NRBP1Q9UHY1 535 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 CNTNAP5Q8WYK1 1306 aa17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
IGHV3-53-201ENST00000390627 ASB14A6NK59 587 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 CALML3P27482 149 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 CDC27P30260 824 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 RPS6P62753 249 aaKnown RBP17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 CCDC82Q8N4S0 544 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 FGD4Q96M96 766 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
IGHV3-53-201ENST00000390627 LOC102724159A0A0B4J2E5 919 aa17.38■□□□□ 0.37
IGHV3-53-201ENST00000390627 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
IGHV3-53-201ENST00000390627 MSCO60682 206 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms