RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CYP27B1O15528 508 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 NCAPHQ15003 741 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 NONOQ15233 471 aaKnown RBP eCLIP15.74■□□□□ 0.11
RTF1-201ENST00000389629 SOS2Q07890 1332 aaPredicted RBP15.74■□□□□ 0.11
RTF1-201ENST00000389629 TBCAO75347 108 aaKnown RBP15.74■□□□□ 0.11
RTF1-201ENST00000389629 FTCDO95954 541 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 ATP1A1P05023 1023 aaKnown RBP15.74■□□□□ 0.11
RTF1-201ENST00000389629 EEF1GP26641 437 aaKnown RBP15.74■□□□□ 0.11
RTF1-201ENST00000389629 CEMIPQ8WUJ3 1361 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 TRIM49BA6NDI0 452 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 SYCP3Q8IZU3 236 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 MRRFQ96E11 262 aaKnown RBP15.74■□□□□ 0.11
RTF1-201ENST00000389629 CCDC77Q9BR77 488 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 TRIM7Q9C029 511 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.74■□□□□ 0.11
RTF1-201ENST00000389629 CYP2D7A0A087X1C5 515 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 RGS16O15492 202 aaPredicted RBP15.73■□□□□ 0.11
RTF1-201ENST00000389629 LONP1P36776 959 aaKnown RBP15.73■□□□□ 0.11
RTF1-201ENST00000389629 TECP42680 631 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 CORO7P57737 925 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 MTMR3Q13615 1198 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 LMNTD2Q8IXW0 634 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 MMS19Q96T76 1030 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 SENP2Q9HC62 589 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 HPS5Q9UPZ3 1129 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 DIP2CQ9Y2E4 1556 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 FOXR1Q6PIV2 292 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
RTF1-201ENST00000389629 SNX29Q8TEQ0 813 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 NKIRAS1Q9NYS0 192 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 TRIM10Q9UDY6 481 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 GJC1P36383 396 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 FBXO2Q9UK22 296 aaPredicted RBP15.73■□□□□ 0.11
RTF1-201ENST00000389629 ACTN4O43707 911 aaKnown RBP15.73■□□□□ 0.11
RTF1-201ENST00000389629 PLEKHA8P1O95397 391 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 CETN1Q12798 172 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 PDIA6Q15084 440 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.73■□□□□ 0.11
RTF1-201ENST00000389629 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
RTF1-201ENST00000389629 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
RTF1-201ENST00000389629 GRIN1Q05586 938 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 BEND6Q5SZJ8 279 aaPredicted RBP15.72■□□□□ 0.11
RTF1-201ENST00000389629 SH2D3CQ8N5H7 860 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 MB21D1Q8N884 522 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 UTYO14607 1347 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 A0A1B0GTH6 734 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 CCDC160A6NGH7 325 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 LRRC31Q6UY01 552 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
RTF1-201ENST00000389629 STIM2Q9P246 746 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 APBA1Q02410 837 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 ALS2CLQ60I27 953 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 DENND2CQ68D51 928 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 SEMA3EO15041 775 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 ZNF185O15231 689 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 PDE6BP35913 854 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 NR1I3Q14994 352 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 FAM133BQ5BKY9 247 aaKnown RBP15.72■□□□□ 0.11
RTF1-201ENST00000389629 AP1ARQ63HQ0 302 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 CHP1Q99653 195 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 PRM3Q9NNZ6 103 aa15.72■□□□□ 0.11
RTF1-201ENST00000389629 MXRA7P84157 204 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 RASGRF1Q13972 1273 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 NLRP3Q96P20 1036 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 LSM14BQ9BX40 385 aaKnown RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 NPHP4O75161 1426 aaPredicted RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 TCHHQ07283 1943 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 CTNND1O60716 968 aaKnown RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 EIF4A3P38919 411 aaKnown RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 ILDR1Q86SU0 546 aaPredicted RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 NOVA2Q9UNW9 492 aaKnown RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 MAP3K15Q6ZN16 1313 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 STK36Q9NRP7 1315 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 POLR2FP61218 127 aaKnown RBP15.71■□□□□ 0.11
RTF1-201ENST00000389629 GUCY1A3Q02108 690 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 KRT25Q7Z3Z0 450 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 ASAP1Q9ULH1 1129 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 CD2APQ9Y5K6 639 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 PTPRUQ92729 1446 aa15.71■□□□□ 0.11
RTF1-201ENST00000389629 UBE2Q2LH0YL09 131 aa15.71■□□□□ 0.1
RTF1-201ENST00000389629 PRPHP41219 470 aa15.71■□□□□ 0.1
RTF1-201ENST00000389629 DYNLL1P63167 89 aaKnown RBP15.71■□□□□ 0.1
RTF1-201ENST00000389629 GSTO1P78417 241 aa15.71■□□□□ 0.1
RTF1-201ENST00000389629 PICALMQ13492 652 aa15.71■□□□□ 0.1
RTF1-201ENST00000389629 C6orf163Q5TEZ5 329 aa15.71■□□□□ 0.1
RTF1-201ENST00000389629 FNBP4Q8N3X1 1017 aaPredicted RBP15.71■□□□□ 0.1
RTF1-201ENST00000389629 FAM205CA6NFA0 338 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 LDHBP07195 334 aaKnown RBP15.7■□□□□ 0.1
RTF1-201ENST00000389629 HERC4Q5GLZ8 1057 aaPredicted RBP15.7■□□□□ 0.1
RTF1-201ENST00000389629 EMBQ6PCB8 327 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 TRIM65Q6PJ69 517 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 CCDC197Q8NCU1 140 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 TTLL11Q8NHH1 800 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 CTNNA2P26232 953 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 ZBED6P86452 979 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms