RNA–Protein interactions for RNA: ENST00000389363.4

TM6SF2-201, Transcript of transmembrane 6 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF2, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF2-201ENST00000389363 CYTH3O43739 400 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 SEC24BO95487 1268 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 IGHA2P01877 340 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 GJB1P08034 283 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 SLC35G1Q2M3R5 365 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 FBXO11Q86XK2 927 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 MTMR8Q96EF0 704 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.522e-7■■■■□ 23.4
TM6SF2-201ENST00000389363 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
TM6SF2-201ENST00000389363 RBBP6Q7Z6E9 1792 aaKnown RBP18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 POTEB2H3BUK9 544 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 ZBTB5O15062 677 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 GNAQP50148 359 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 RUFY3Q7L099 469 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 FANCBQ8NB91 859 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 PIGSQ96S52 555 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 LZTS2Q9BRK4 669 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 TINF2Q9BSI4 451 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 TM6SF1Q9BZW5 370 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 ZSWIM6Q9HCJ5 1215 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 CYP39A1Q9NYL5 469 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 PLXNA1Q9UIW2 1896 aa18.3■□□□□ 0.52
TM6SF2-201ENST00000389363 ABCB11O95342 1321 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 ZBTB43O43298 467 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 PLEKHA8P1O95397 391 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 EN2P19622 333 aaPredicted RBP18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 CCND3P30281 292 aaPredicted RBP18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 CNTN2Q02246 1040 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 BRF1Q92994 677 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 KIAA0100Q14667 2235 aaKnown RBP18.29■□□□□ 0.52
TM6SF2-201ENST00000389363 PTPDC1A2A3K4 754 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 GJA8P48165 433 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 APOBRQ0VD83 1088 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 CMTR1Q8N1G2 835 aaKnown RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 FAM133AQ8N9E0 248 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 U2AF1L4Q8WU68 220 aaKnown RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 UPF3BQ9BZI7 483 aaKnown RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 PPP1R11O60927 126 aaPredicted RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 CYBAP13498 195 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 CNGA1P29973 690 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 ANAPC15P60006 121 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 RNF207Q6ZRF8 634 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 ZNF467Q7Z7K2 595 aaPredicted RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 SRBD1Q8N5C6 995 aaKnown RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 FGD4Q96M96 766 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 MRPL11Q9Y3B7 192 aaKnown RBP18.28■□□□□ 0.52
TM6SF2-201ENST00000389363 MYH6P13533 1939 aa18.27■□□□□ 0.52
TM6SF2-201ENST00000389363 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 GOLGA8AA7E2F4 631 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 GOLGA8BA8MQT2 603 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 SGPL1O95470 568 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 CALML3P27482 149 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 RTN1Q16799 776 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 MAMDC4Q6UXC1 1216 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 TMTC3Q6ZXV5 915 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 CCDC82Q8N4S0 544 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 TRPV1Q8NER1 839 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.51
TM6SF2-201ENST00000389363 MKI67P46013 3256 aaKnown RBP18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 SYNGAP1Q96PV0 1343 aa18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 SOWAHBA6NEL2 793 aa18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 RGS19P49795 217 aa18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 RPS6P62753 249 aaKnown RBP18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 TRAF1Q13077 416 aa18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 PURBQ96QR8 312 aaKnown RBP18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 SEC63Q9UGP8 760 aaKnown RBP18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 CNPY2Q9Y2B0 182 aa18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 BAZ2BQ9UIF8 2168 aaKnown RBP18.26■□□□□ 0.51
TM6SF2-201ENST00000389363 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
TM6SF2-201ENST00000389363 RCAN1P53805 252 aa18.25■□□□□ 0.51
TM6SF2-201ENST00000389363 MCF2L2Q86YR7 1114 aa18.25■□□□□ 0.51
TM6SF2-201ENST00000389363 RGS22Q8NE09 1264 aa18.25■□□□□ 0.51
TM6SF2-201ENST00000389363 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
TM6SF2-201ENST00000389363 SNAI1O95863 264 aaPredicted RBP18.24■□□□□ 0.51
TM6SF2-201ENST00000389363 METAP2P50579 478 aaKnown RBP eCLIP18.24■□□□□ 0.51
TM6SF2-201ENST00000389363 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
TM6SF2-201ENST00000389363 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
TM6SF2-201ENST00000389363 TBC1D5Q92609 795 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms