RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CYP2B6P20813 491 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 SLC35G1Q2M3R5 365 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 SLC9C1Q4G0N8 1177 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 ANKRD35Q8N283 1001 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
CKAP2-202ENST00000378034 RRP36Q96EU6 259 aaKnown RBP15.36■□□□□ 0.05
CKAP2-202ENST00000378034 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 PFASO15067 1338 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 PLEKHA8P1O95397 391 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 NEK4P51957 841 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 RAB11FIP4Q86YS3 637 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 RGS22Q8NE09 1264 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 PIGSQ96S52 555 aa15.35■□□□□ 0.05
CKAP2-202ENST00000378034 PDIA3P30101 505 aaKnown RBP15.35■□□□□ 0.05
CKAP2-202ENST00000378034 FAM217BQ9NTX9 383 aaPredicted RBP15.35■□□□□ 0.05
CKAP2-202ENST00000378034 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
CKAP2-202ENST00000378034 MRPL11Q9Y3B7 192 aaKnown RBP15.35■□□□□ 0.05
CKAP2-202ENST00000378034 DNAJC25-GNG10A0A024R161 153 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 COBLO75128 1261 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 USH1GQ495M9 461 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 MUM1L1Q5H9M0 696 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 HOMER1Q86YM7 354 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 KIF2CQ99661 725 aa15.34■□□□□ 0.05
CKAP2-202ENST00000378034 A1CFQ9NQ94 594 aaKnown RBP15.34■□□□□ 0.05
CKAP2-202ENST00000378034 HMGCRP04035 888 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 CDC27P30260 824 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 UBXN2AP68543 259 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 ZNF792Q3KQV3 632 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 MCF2L2Q86YR7 1114 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 SAMD3Q8N6K7 520 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 ABHD8Q96I13 439 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 TBC1D32Q96NH3 1257 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 PCDHA1Q9Y5I3 950 aa15.33■□□□□ 0.05
CKAP2-202ENST00000378034 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
CKAP2-202ENST00000378034 PLXNA1Q9UIW2 1896 aa15.33■□□□□ 0.04
CKAP2-202ENST00000378034 AK2P54819 239 aa15.33■□□□□ 0.04
CKAP2-202ENST00000378034 FUT2Q10981 343 aa15.33■□□□□ 0.04
CKAP2-202ENST00000378034 ZNF467Q7Z7K2 595 aaPredicted RBP15.33■□□□□ 0.04
CKAP2-202ENST00000378034 MSL3Q8N5Y2 521 aaKnown RBP15.33■□□□□ 0.04
CKAP2-202ENST00000378034 NPLOC4Q8TAT6 608 aa15.33■□□□□ 0.04
CKAP2-202ENST00000378034 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
CKAP2-202ENST00000378034 RBM27Q9P2N5 1060 aaKnown RBP15.33■□□□□ 0.04
CKAP2-202ENST00000378034 BAZ2BQ9UIF8 2168 aaKnown RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 PPP1R11O60927 126 aaPredicted RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 PGK2P07205 417 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 ELNP15502 786 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 ADD1P35611 737 aaKnown RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 RABEP1Q15276 862 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 CMTR1Q8N1G2 835 aaKnown RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 SH3TC2Q8TF17 1288 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 TRIB2Q92519 343 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 MAML3Q96JK9 1138 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 ZNF333Q96JL9 665 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 MAP3K20Q9NYL2 800 aaKnown RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 CNTNAP5Q8WYK1 1306 aa15.32■□□□□ 0.04
CKAP2-202ENST00000378034 RBBP6Q7Z6E9 1792 aaKnown RBP15.32■□□□□ 0.04
CKAP2-202ENST00000378034 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 NFIBO00712 420 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 IGHA2P01877 340 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 MFSD14CQ5VZR4 134 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 NSMFQ6X4W1 530 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 LOC102724159A0A0B4J2E5 919 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 GHRHRQ02643 423 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 PWP2Q15269 919 aaKnown RBP15.31■□□□□ 0.04
CKAP2-202ENST00000378034 CCL14Q16627 93 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 CPLX2Q6PUV4 134 aaKnown RBP15.31■□□□□ 0.04
CKAP2-202ENST00000378034 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
CKAP2-202ENST00000378034 hCG_1984214I3L0E3 225 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 PFKFB2O60825 505 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 INHAP05111 366 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 IFNAR1P17181 557 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 TAL1P17542 331 aaPredicted RBP15.3■□□□□ 0.04
CKAP2-202ENST00000378034 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
CKAP2-202ENST00000378034 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
CKAP2-202ENST00000378034 NTRK3Q16288 839 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 ZNF713Q8N859 430 aaPredicted RBP15.3■□□□□ 0.04
CKAP2-202ENST00000378034 PIBF1Q8WXW3 757 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
CKAP2-202ENST00000378034 FLRT1Q9NZU1 646 aa15.3■□□□□ 0.04
CKAP2-202ENST00000378034 ADD3Q9UEY8 706 aaKnown RBP15.3■□□□□ 0.04
CKAP2-202ENST00000378034 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 PRPF3O43395 683 aaKnown RBP15.29■□□□□ 0.04
CKAP2-202ENST00000378034 MAP3K21Q5TCX8 1036 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 MAMDC4Q6UXC1 1216 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 TEX2Q8IWB9 1127 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
CKAP2-202ENST00000378034 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 RNF26Q9BY78 433 aaPredicted RBP15.29■□□□□ 0.04
CKAP2-202ENST00000378034 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
CKAP2-202ENST00000378034 SYNGAP1Q96PV0 1343 aa15.29■□□□□ 0.04
CKAP2-202ENST00000378034 CPLX1O14810 134 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms