RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 RASA1P20936 1047 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 RPL13P26373 211 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 TYRO3Q06418 890 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 MTERF2Q49AM1 385 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 ANKRD13CQ8N6S4 541 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 DCAF4Q8WV16 495 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 ZNF668Q96K58 619 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 ZDHHC15Q96MV8 337 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 NRBP2Q9NSY0 501 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 TRMT1Q9NXH9 659 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 TAF6LQ9Y6J9 622 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 RAPGEF1Q13905 1077 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 GRIK5Q16478 980 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 DACT2Q5SW24 774 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 FBXO40Q9UH90 709 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 CDC27P30260 824 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 ATL3Q6DD88 541 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 GALNT17Q6IS24 598 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 ADGRA1Q86SQ6 560 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 SLC7A3Q8WY07 619 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 CEP170P1Q96L14 293 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 LY9Q9HBG7 655 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 RGPD8O14715 1765 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 PRPF3O43395 683 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 HOXD10P28358 340 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 HDLBPQ00341 1268 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 MB21D2Q8IYB1 491 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 NT5C3AQ9H0P0 336 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 IL25Q9H293 177 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 TMEM260Q9NX78 707 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 ZNF609O15014 1411 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 KIF20BQ96Q89 1820 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 RGL2O15211 777 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 CCND2P30279 289 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 STXBP2Q15833 593 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 MOB2Q70IA6 237 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 ATG4CQ96DT6 458 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 MMP19Q99542 508 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 MYL3P08590 195 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 TRPC3Q13507 836 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 BAATQ14032 418 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 MCTP2Q6DN12 878 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 TMED8Q6PL24 325 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 SESTD1Q86VW0 696 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 FAM178BQ8IXR5 827 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 CSGALNACT2Q8N6G5 542 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 NSUN6Q8TEA1 469 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 VPS16Q9H269 839 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 ACAD9Q9H845 621 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 LARSQ9P2J5 1176 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 PCDHA6Q9UN73 950 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 PCDHA8Q9Y5H6 950 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 CYP2J2P51589 502 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 TOB2Q14106 344 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 ATP6V0A1Q93050 837 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 PSMD1Q99460 953 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 TEX13BQ9BXU2 312 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 VCPKMTQ9H867 229 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 ZFYVE28Q9HCC9 887 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
CRNKL1-202ENST00000377340 CETN3O15182 167 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ORC4O43929 436 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CTNND1O60716 968 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ADCY5O95622 1261 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 TNNI1P19237 187 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 TBC1D8BQ0IIM8 1120 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 FAM160B1Q5W0V3 765 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 GOLGA6L1Q8N7Z2 621 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CCDC127Q96BQ5 260 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CDHR1Q96JP9 859 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ZNF512BQ96KM6 892 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ANKFY1Q9P2R3 1169 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 BICDL2A1A5D9 508 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ERLIN2O94905 339 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 IL1R1P14778 569 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ODR4Q5SWX8 454 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CNNM4Q6P4Q7 775 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 LUZP1Q86V48 1076 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 TRMT44Q8IYL2 757 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CTNNBL1Q8WYA6 563 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ABCB11O95342 1321 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 TMCO5BA8MYB1 307 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 TRPA1O75762 1119 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 BRD1O95696 1058 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 SRGAP2CP0DJJ0 459 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CETPP11597 493 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 CAP2P40123 477 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 PPP4CP60510 307 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 UBXN1Q04323 297 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 MTMR1Q13613 665 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 ZBTB8OSQ8IWT0 167 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 FAM43AQ8N2R8 423 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 TAF4BQ92750 862 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms