RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 EEF2P13639 858 aaKnown RBP12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NEDD4P46934 1319 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CDK8P49336 464 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NT5C2P49902 561 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ANTXR2P58335 489 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 KCTD2Q14681 263 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 FAM83BQ5T0W9 1011 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 BRF1Q92994 677 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 TMEM87BQ96K49 555 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 TINF2Q9BSI4 451 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
HLA-DQA1-202ENST00000374949 MCM3APO60318 1980 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 VWA5AO00534 786 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ORC4O43929 436 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ME3Q16798 604 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 RNF180Q86T96 592 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 RIOX2Q8IUF8 465 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZNF274Q96GC6 653 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 SLKQ9H2G2 1235 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZNF214Q9UL59 606 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 PRUNE2Q8WUY3 3088 aa12.74□□□□□ -0.37
HLA-DQA1-202ENST00000374949 IFIT3O14879 490 aaKnown RBP12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 RANBP6O60518 1105 aaKnown RBP12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ADAMTS4O75173 837 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZNF865P0CJ78 1059 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 AKR1A1P14550 325 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 RAG1P15918 1043 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 STAT3P40763 770 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 EVCP57679 992 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 FPGSQ05932 587 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 SART3Q15020 963 aaKnown RBP12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 IGDCC4Q8TDY8 1250 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQA1-202ENST00000374949 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ERICH2A1L162 156 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 PFKFB2O60825 505 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 PRDM1O75626 825 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 LARGE1O95461 756 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 LIFRP42702 1097 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 TMEM67Q5HYA8 995 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 KANSL2Q9H9L4 492 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 GOPCQ9HD26 462 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 TMEM39AQ9NV64 488 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CHMP5Q9NZZ3 219 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
HLA-DQA1-202ENST00000374949 MYADML2A6NDP7 307 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 DNAJB2P25686 324 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 DDIT3P35638 169 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ACLYP53396 1101 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 STK3Q13188 491 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 GRIN2CQ14957 1233 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 IQCA1Q86XH1 822 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 CCDC83Q8IWF9 413 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 SLF1Q9BQI6 1058 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 DIS3Q9Y2L1 958 aaKnown RBP12.71□□□□□ -0.37
HLA-DQA1-202ENST00000374949 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 COPB2P35606 906 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TFAP4Q01664 338 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms