RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RILPL1Q5EBL4 403 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 CACNA2D3Q8IZS8 1091 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 TRIM58Q8NG06 486 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 NFU1Q9UMS0 254 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 ANGEL1Q9UNK9 670 aaKnown RBP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 UBN2Q6ZU65 1347 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 A0A087X0B3 334 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 NEURL1BA8MQ27 555 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 ATP2C2O75185 946 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 SMNDC1O75940 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 TRIM37O94972 964 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 PIP4K2AP48426 406 aaPredicted RBP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 KIF5AQ12840 1032 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 GCKRQ14397 625 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 GDF3Q9NR23 364 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 RWDD2AQ9UIY3 292 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 PCDHB6Q9Y5E3 794 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 DISP2A7MBM2 1401 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 C5orf60A6NFR6 353 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 CARSP49589 748 aaKnown RBP14.33□□□□□ -0.12
PRPF4-201ENST00000374198 SLMAPQ14BN4 828 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 NTRK3Q16288 839 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 CCDC181Q5TID7 509 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 MB21D1Q8N884 522 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 CCT6BQ92526 530 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 OSBPL9Q96SU4 736 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 WNK3Q9BYP7 1800 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 UBE2Q2LH0YL09 131 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 RANBP6O60518 1105 aaKnown RBP14.33□□□□□ -0.12
PRPF4-201ENST00000374198 ANP32DO95626 131 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 RPS6KA3P51812 740 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 PAK2Q13177 524 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 WASHC4Q2M389 1173 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 HIBCHQ6NVY1 386 aaPredicted RBP14.33□□□□□ -0.12
PRPF4-201ENST00000374198 RIC3Q7Z5B4 369 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 NEUROD6Q96NK8 337 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 NHEJ1Q9H9Q4 299 aaPredicted RBP14.33□□□□□ -0.12
PRPF4-201ENST00000374198 SMARCAL1Q9NZC9 954 aa14.33□□□□□ -0.12
PRPF4-201ENST00000374198 PPIP5K2O43314 1243 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 GLI1P08151 1106 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 TCP1P17987 556 aaKnown RBP14.32□□□□□ -0.12
PRPF4-201ENST00000374198 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRPF4-201ENST00000374198 APOA5Q6Q788 366 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 DEFB132Q7Z7B7 95 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 CCDC170Q8IYT3 715 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 TCP11Q8WWU5 503 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 ACSBG1Q96GR2 724 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 BORCS6Q96GS4 357 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 TMBIM4Q9HC24 238 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 CORO1CQ9ULV4 474 aaPredicted RBP14.32□□□□□ -0.12
PRPF4-201ENST00000374198 DDX60Q8IY21 1712 aaKnown RBP14.32□□□□□ -0.12
PRPF4-201ENST00000374198 A0A1W2PQC6 194 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 TACC1O75410 805 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 MMP1P03956 469 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 RIPK1Q13546 671 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 PPP1R7Q15435 360 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 ARMC9Q7Z3E5 817 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 DIS3L2Q8IYB7 885 aaKnown RBP14.32□□□□□ -0.12
PRPF4-201ENST00000374198 FAM210AQ96ND0 272 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 SLC12A6Q9UHW9 1150 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
PRPF4-201ENST00000374198 MYO5AQ9Y4I1 1855 aaKnown RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 ZNF213O14771 459 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 PRPHP41219 470 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 GUCY2FP51841 1108 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 PAK1Q13153 545 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 NFRKBQ6P4R8 1299 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 MARCH10Q8NA82 808 aaPredicted RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 IFT81Q8WYA0 676 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 RBM12Q9NTZ6 932 aaKnown RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 AATFQ9NY61 560 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 EHD2Q9NZN4 543 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 HYOU1Q9Y4L1 999 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 CAPN6Q9Y6Q1 641 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 EP400Q96L91 3159 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 ERICH2A1L162 156 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 GOLGA6L10A6NI86 522 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 CXCR5P32302 372 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 BAG6P46379 1132 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 RAB27AP51159 221 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 MAATS1Q7Z4T9 603 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 CCHCR1Q8TD31 782 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 EPSTI1Q96J88 318 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms