RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 NOGQ13253 232 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 DIS3L2Q8IYB7 885 aaKnown RBP16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 CPXCR1Q8N123 301 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 PKNOX2Q96KN3 472 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 PARK7Q99497 189 aaKnown RBP16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 TEX13BQ9BXU2 312 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 C6orf50Q9HD87 102 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 PCDHA4Q9UN74 947 aa16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 COL11A1P12107 1806 aaPredicted RBP16.81■□□□□ 0.28
SMPDL3B-201ENST00000373888 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 CYP2C8P10632 490 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 U2AF2P26368 475 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 KRT2P35908 639 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 TM4SF4P48230 202 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 IFNL1Q8IU54 200 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 CAPNS2Q96L46 248 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 GLT8D2Q9H1C3 349 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 FOXP1Q9H334 677 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 BTBD7Q9P203 1132 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 RABGAP1Q9Y3P9 1069 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 BTBD18B2RXH4 712 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 M0R2N6 131 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 CNMDO75829 334 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 STAT3P40763 770 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 ADCY7P51828 1080 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 RESTQ13127 1097 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 MCTP1Q6DN14 999 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 CUL5Q93034 780 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 ZSCAN16Q9H4T2 348 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 PSTPIP2Q9H939 334 aa16.8■□□□□ 0.28
SMPDL3B-201ENST00000373888 OPLAHO14841 1288 aa16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 MRPL12P52815 198 aaKnown RBP16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 SMCR8Q8TEV9 937 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 TNFRSF25Q93038 417 aa16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 ZIC5Q96T25 663 aa16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 RBPJLQ9UBG7 517 aa16.79■□□□□ 0.28
SMPDL3B-201ENST00000373888 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 ALAS1P13196 640 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 GRM1Q13255 1194 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 NR5A1Q13285 461 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 RIOX2Q8IUF8 465 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 SPATC1LQ9H0A9 340 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 TXNRD2Q9NNW7 524 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 RIPK3Q9Y572 518 aa16.78■□□□□ 0.28
SMPDL3B-201ENST00000373888 ADGRA2Q96PE1 1338 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 PIK3CDO00329 1044 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 CLK2P49760 499 aaKnown RBP16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 GHRHRQ02643 423 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 PLS1Q14651 629 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 REXO1Q8N1G1 1221 aaKnown RBP16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 TRERF1Q96PN7 1200 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 PAGR1Q9BTK6 254 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 ATP6V1DQ9Y5K8 247 aa16.77■□□□□ 0.28
SMPDL3B-201ENST00000373888 SMCHD1A6NHR9 2005 aa16.77■□□□□ 0.27
SMPDL3B-201ENST00000373888 MEIS2O14770 477 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 AOC2O75106 756 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 COPB2P35606 906 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 ERVK-9P63128 1117 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 ERVK-24P63145 666 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 GSE1Q14687 1217 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 MCF2L2Q86YR7 1114 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 SAMD3Q8N6K7 520 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 MAF1Q9H063 256 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 RNF146Q9NTX7 359 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 MORF4L1Q9UBU8 362 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 PCDHA6Q9UN73 950 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 PCDHA8Q9Y5H6 950 aa16.76■□□□□ 0.27
SMPDL3B-201ENST00000373888 NFIBO00712 420 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 PEX10O60683 326 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 SLC25A27O95847 323 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 TAF1CQ15572 869 aaPredicted RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 MUM1L1Q5H9M0 696 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 CHST13Q8NET6 341 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 RASGRP4Q8TDF6 673 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 HOMER2Q9NSB8 354 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 RBBP6Q7Z6E9 1792 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms