RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ARMCX3Q9UH62 379 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 ARHGEF35A5YM69 484 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 INTS8Q75QN2 995 aaKnown RBP19.2■□□□□ 0.66
PTPRU-202ENST00000373779 UBN2Q6ZU65 1347 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 KCNJ6P48051 423 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 ZBTB16Q05516 673 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 DENND2CQ68D51 928 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 PKD2L1Q9P0L9 805 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 HDAC9Q9UKV0 1011 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 MB21D1Q8N884 522 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 LARP4BQ92615 738 aaKnown RBP19.2■□□□□ 0.66
PTPRU-202ENST00000373779 PCDHB13Q9Y5F0 798 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 EXOC3O60645 756 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 STAT1P42224 750 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 MAP3K9P80192 1104 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 TRIM7Q9C029 511 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 DDX25Q9UHL0 483 aaKnown RBP19.2■□□□□ 0.66
PTPRU-202ENST00000373779 TAF6LQ9Y6J9 622 aa19.2■□□□□ 0.66
PTPRU-202ENST00000373779 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 BCRP11274 1271 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 MAN2A1Q16706 1144 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 FNBP4Q8N3X1 1017 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-202ENST00000373779 MYOM1P52179 1685 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 ARL6IP4Q66PJ3 421 aaKnown RBP19.19■□□□□ 0.66
PTPRU-202ENST00000373779 TBC1D22AQ8WUA7 517 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 CCNE1P24864 410 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 TTC19Q6DKK2 380 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-202ENST00000373779 ABHD10Q9NUJ1 306 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 EHHADHQ08426 723 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 ATG9AQ7Z3C6 839 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 JRKLQ9Y4A0 524 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 PPLO60437 1756 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 CYP2D7A0A087X1C5 515 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 GYS2P54840 703 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 ADAM9Q13443 819 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 PSTPIP2Q9H939 334 aa19.19■□□□□ 0.66
PTPRU-202ENST00000373779 ERVV-1B6SEH8 477 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 USH1GQ495M9 461 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 KRT12Q99456 494 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 CRKLP46109 303 aaKnown RBP19.18■□□□□ 0.66
PTPRU-202ENST00000373779 KCTD16Q68DU8 428 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 CCDC105Q8IYK2 499 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 ASIC3Q9UHC3 531 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 MRFAP1Q9Y605 127 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 PTPROQ16827 1216 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 DPF2Q92785 391 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 ADAM21Q9UKJ8 722 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 SETD1BQ9UPS6 1966 aaKnown RBP19.18■□□□□ 0.66
PTPRU-202ENST00000373779 CHGBP05060 677 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 CASP1P29466 404 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 CUL4BQ13620 913 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
PTPRU-202ENST00000373779 ARHGAP44Q17R89 818 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 CEP128Q6ZU80 1094 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 MOCS3O95396 460 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 NAA25Q14CX7 972 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 ZNF365Q70YC5 407 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 LRRC47Q8N1G4 583 aaKnown RBP19.17■□□□□ 0.66
PTPRU-202ENST00000373779 KCNB2Q92953 911 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 DISC1Q9NRI5 854 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 PARP2Q9UGN5 583 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 CACNA2D3Q8IZS8 1091 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 ABCB4P21439 1286 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
PTPRU-202ENST00000373779 GDAQ9Y2T3 454 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 ADGRG1Q9Y653 693 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 A0A1B0GUA9 196 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 FOXN1O15353 648 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 MXRA7P84157 204 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 MFSD14BQ5SR56 506 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 EFCAB13Q8IY85 973 aa19.17■□□□□ 0.66
PTPRU-202ENST00000373779 VWDEQ8N2E2 1590 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 ALDH3A1P30838 453 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 BTDP43251 543 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 PPP2R5EQ16537 467 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 EPC1Q9H2F5 836 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 ZNF804BA4D1E1 1349 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 HEXIM1O94992 359 aaKnown RBP19.16■□□□□ 0.66
PTPRU-202ENST00000373779 H2AFZP0C0S5 128 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 ATP11AP98196 1134 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 H2AFVQ71UI9 128 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 FUCA2Q9BTY2 467 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 DEPDC5O75140 1603 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 RGS16O15492 202 aaPredicted RBP19.16■□□□□ 0.66
PTPRU-202ENST00000373779 TADA3O75528 432 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 RCAN1P53805 252 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 CYP27A1Q02318 531 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 WDR44Q5JSH3 913 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 TMTC3Q6ZXV5 915 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 PLCG1P19174 1290 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 ALX1Q15699 326 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 TCHPQ9BT92 498 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 DPH5Q9H2P9 285 aa19.16■□□□□ 0.66
PTPRU-202ENST00000373779 BUB1BO60566 1050 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms