RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 CAPN15O75808 1086 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 PLEKHA8P1O95397 391 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 MYCP01106 439 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-205ENST00000373568 CALM1P0DP23 149 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 CALM2P0DP24 149 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 CALM3P0DP25 149 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
HDAC8-205ENST00000373568 SMARCA1P28370 1054 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 ANAPC15P60006 121 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 CACNB2Q08289 660 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-205ENST00000373568 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-205ENST00000373568 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 PAK6Q9NQU5 681 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-205ENST00000373568 ASTN1O14525 1302 aa15.32■□□□□ 0.04
HDAC8-205ENST00000373568 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 ZBTB5O15062 677 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 EIF5BO60841 1220 aaKnown RBP15.31■□□□□ 0.04
HDAC8-205ENST00000373568 KIF5BP33176 963 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 CYP2C19P33261 490 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 RCAN1P53805 252 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 EVCP57679 992 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 TOB2Q14106 344 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-205ENST00000373568 TMTC3Q6ZXV5 915 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 SRBD1Q8N5C6 995 aaKnown RBP15.31■□□□□ 0.04
HDAC8-205ENST00000373568 FANCBQ8NB91 859 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 TRPV1Q8NER1 839 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 BRF1Q92994 677 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 SHISA4Q96DD7 197 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 PIGSQ96S52 555 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 UPF3BQ9BZI7 483 aaKnown RBP15.31■□□□□ 0.04
HDAC8-205ENST00000373568 FAM217BQ9NTX9 383 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-205ENST00000373568 SLC5A4Q9NY91 659 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 CYP39A1Q9NYL5 469 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-205ENST00000373568 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
HDAC8-205ENST00000373568 SOWAHBA6NEL2 793 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 OPLAHO14841 1288 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 PFASO15067 1338 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 ZBTB43O43298 467 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
HDAC8-205ENST00000373568 ABCB11O95342 1321 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 CYBAP13498 195 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 CNTN2Q02246 1040 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 FUT2Q10981 343 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 USH1GQ495M9 461 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 MAMDC4Q6UXC1 1216 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 ZNF467Q7Z7K2 595 aaPredicted RBP15.3■□□□□ 0.04
HDAC8-205ENST00000373568 FBXO11Q86XK2 927 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 CMTR1Q8N1G2 835 aaKnown RBP15.3■□□□□ 0.04
HDAC8-205ENST00000373568 DDX11Q96FC9 970 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 LZTS2Q9BRK4 669 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC8-205ENST00000373568 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
HDAC8-205ENST00000373568 CNTNAP5Q8WYK1 1306 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 GJB1P08034 283 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 CCND3P30281 292 aaPredicted RBP15.29■□□□□ 0.04
HDAC8-205ENST00000373568 RGS19P49795 217 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 GNAQP50148 359 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 GHRHRQ02643 423 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 RGS22Q8NE09 1264 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
HDAC8-205ENST00000373568 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 RNF208Q9H0X6 261 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
HDAC8-205ENST00000373568 SYNGAP1Q96PV0 1343 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 CDC27P30260 824 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 GJA8P48165 433 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 BAATQ14032 418 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-205ENST00000373568 RTN1Q16799 776 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 NSMFQ6X4W1 530 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
HDAC8-205ENST00000373568 TBC1D5Q92609 795 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 TMEM106CQ9BVX2 250 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 MAF1Q9H063 256 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 CRISPLD2Q9H0B8 497 aa15.28■□□□□ 0.04
HDAC8-205ENST00000373568 HMX1Q9NP08 348 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-205ENST00000373568 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
HDAC8-205ENST00000373568 GOLGA8AA7E2F4 631 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 SNAI1O95863 264 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-205ENST00000373568 EN2P19622 333 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-205ENST00000373568 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.04
HDAC8-205ENST00000373568 FGD1P98174 961 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.04
HDAC8-205ENST00000373568 U2AF1L4Q8WU68 220 aaKnown RBP15.27■□□□□ 0.04
HDAC8-205ENST00000373568 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms