RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SMTNP53814 917 aa15.41■□□□□ 0.06
RAPGEF1-202ENST00000372190 MRPS15P82914 257 aaKnown RBP15.41■□□□□ 0.06
RAPGEF1-202ENST00000372190 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 ATP5JP18859 108 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 ZNF174Q15697 407 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 FAM47CQ5HY64 1035 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 CCDC124Q96CT7 223 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 DDX42Q86XP3 938 aaKnown RBP eCLIP15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 PRAMEF22A3QJZ6 481 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 CCDC169A6NNP5 214 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 PMS1P54277 932 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 PSMD2Q13200 908 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 GRAPQ13588 217 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 MMS22LQ6ZRQ5 1243 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 BRAPQ7Z569 592 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 TMCO5AQ8N6Q1 288 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 GRAPLQ8TC17 118 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 USP17L12C9JPN9 530 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 USP17L21D6R901 530 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 SPOUT1Q5T280 376 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 HAUS3Q68CZ6 603 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 PIK3AP1Q6ZUJ8 805 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 SRGAP1Q7Z6B7 1085 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 CRB1P82279 1406 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 DNM2P50570 870 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 NLRX1Q86UT6 975 aa15.4■□□□□ 0.06
RAPGEF1-202ENST00000372190 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 SEMA3EO15041 775 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 PHBP35232 272 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 NBPF20Q3BBV1 942 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 DBNLQ9UJU6 430 aaKnown RBP15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 ALAS1P13196 640 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 ICA1Q05084 483 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 CUL4BQ13620 913 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 TXNRD1Q16881 649 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 NCAPH2Q6IBW4 605 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 SND1Q7KZF4 910 aaKnown RBP eCLIP15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 YIPF3Q9GZM5 350 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 SPON1Q9HCB6 807 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 PDE8BO95263 885 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 TTC4O95801 387 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 STRN3Q13033 797 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 ABCB5Q2M3G0 1257 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 HOMER3Q9NSC5 361 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 ATL3Q6DD88 541 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 CCHCR1Q8TD31 782 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
RAPGEF1-202ENST00000372190 CEP152O94986 1710 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 CDR2Q01850 454 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 ZNF449Q6P9G9 518 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 CTAGE3PQ8IX95 158 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 GABPB2Q8TAK5 448 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 OTUD7AQ8TE49 926 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 FLOT1O75955 427 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 CCNA1P78396 465 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 VPS72Q15906 364 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 NBPF3Q9H094 633 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 BAG5Q9UL15 447 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 KRT71Q3SY84 523 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 SV2BQ7L1I2 683 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 ANKRD35Q8N283 1001 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 ARHGAP18Q8N392 663 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 DDX28Q9NUL7 540 aaKnown RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 PTPRMP28827 1452 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 TMEM232C9JQI7 657 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 IREB2P48200 963 aaKnown RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 GNPTABQ3T906 1256 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 ENAHQ8N8S7 591 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 AKR1B15C9JRZ8 316 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 MCF2LO15068 1137 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 S100BP04271 92 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 CDAN1Q8IWY9 1227 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 LRGUKQ96M69 825 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 USP44Q9H0E7 712 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
RAPGEF1-202ENST00000372190 ADRA2BP18089 450 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 CCT5P48643 541 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 SDR42E1Q8WUS8 393 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 ACTR5Q9H9F9 607 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 TXLNGQ9NUQ3 528 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 DENND2CQ68D51 928 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 MSANTD4Q8NCY6 345 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 VWA3AA6NCI4 1184 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 KRT15P19012 456 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 GUCY2CP25092 1073 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 988 ms