RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 FAM153AQ9UHL3 310 aa15.99■□□□□ 0.15
PHTF1-204ENST00000369604 PDS5AQ29RF7 1337 aaKnown RBP15.98■□□□□ 0.15
PHTF1-204ENST00000369604 ZSCAN5CA6NGD5 496 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-204ENST00000369604 HEXIM1O94992 359 aaKnown RBP15.98■□□□□ 0.15
PHTF1-204ENST00000369604 SMTNP53814 917 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 NLRP5P59047 1200 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 ODF2Q5BJF6 829 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-204ENST00000369604 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 STAG1Q8WVM7 1258 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 ZNF622Q969S3 477 aaKnown RBP eCLIP15.98■□□□□ 0.15
PHTF1-204ENST00000369604 SHISA4Q96DD7 197 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 ZNF233A6NK53 670 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 CYP27B1O15528 508 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 BUB1O43683 1085 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 SRGNP10124 158 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-204ENST00000369604 PAK2Q13177 524 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 ZNF662Q6ZS27 426 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 CAVIN3Q969G5 261 aa15.98■□□□□ 0.15
PHTF1-204ENST00000369604 TNKSO95271 1327 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 PLEKHA8P1O95397 391 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 MDH1P40925 334 aaKnown RBP15.97■□□□□ 0.15
PHTF1-204ENST00000369604 PPP2R5AQ15172 486 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 ALX1Q15699 326 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 SNCBQ16143 134 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 THAP9Q9H5L6 903 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 FAM207AQ9NSI2 230 aaPredicted RBP15.97■□□□□ 0.15
PHTF1-204ENST00000369604 ZNF263O14978 683 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 ITGA6P23229 1130 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 HLTFQ14527 1009 aaKnown RBP eCLIP15.97■□□□□ 0.15
PHTF1-204ENST00000369604 FBXO3Q9UK99 471 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 ATXN2Q99700 1313 aaKnown RBP15.97■□□□□ 0.15
PHTF1-204ENST00000369604 GSG1L2A8MUP6 293 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 NEBLO76041 1014 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 GLI1P08151 1106 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 EZRP15311 586 aaKnown RBP15.97■□□□□ 0.15
PHTF1-204ENST00000369604 MAGEA1P43355 309 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 RNF41Q9H4P4 317 aaPredicted RBP15.97■□□□□ 0.15
PHTF1-204ENST00000369604 SH2D4AQ9H788 454 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 MCM8Q9UJA3 840 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 SPEF2Q9C093 1822 aa15.97■□□□□ 0.15
PHTF1-204ENST00000369604 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 PDHBP11177 359 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 CLNS1AP54105 237 aaKnown RBP15.96■□□□□ 0.15
PHTF1-204ENST00000369604 PKN1Q16512 942 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 CFAP221Q4G0U5 840 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 PREPLQ4J6C6 727 aaPredicted RBP15.96■□□□□ 0.15
PHTF1-204ENST00000369604 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 RUBCNQ92622 972 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 CNOT6LQ96LI5 555 aaKnown RBP15.96■□□□□ 0.15
PHTF1-204ENST00000369604 MMRN2Q9H8L6 949 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 EIF4A3P38919 411 aaKnown RBP15.96■□□□□ 0.15
PHTF1-204ENST00000369604 KIF11P52732 1056 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 RETREG2Q8NC44 543 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 ATP6V1G3Q96LB4 118 aa15.96■□□□□ 0.15
PHTF1-204ENST00000369604 PURBQ96QR8 312 aaKnown RBP15.96■□□□□ 0.15
PHTF1-204ENST00000369604 BACH1O14867 736 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 FAM107AO95990 144 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 YTHDF3Q7Z739 585 aaKnown RBP15.95■□□□□ 0.14
PHTF1-204ENST00000369604 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 TACO1Q9BSH4 297 aaKnown RBP15.95■□□□□ 0.14
PHTF1-204ENST00000369604 HSPA2P54652 639 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 PARP9Q8IXQ6 854 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 IQCKQ8N0W5 287 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 KRT12Q99456 494 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 GREM2Q9H772 168 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
PHTF1-204ENST00000369604 GOLGB1Q14789 3259 aaKnown RBP15.95■□□□□ 0.14
PHTF1-204ENST00000369604 TCRBV5S4A2TA0A5A2 114 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 RPSAP08865 295 aaKnown RBP15.95■□□□□ 0.14
PHTF1-204ENST00000369604 UQCRFS1P1P0C7P4 283 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 ERCC3P19447 782 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 UBA7P41226 1012 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 RASSF7Q02833 373 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 ITIH3Q06033 890 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 CCDC178Q5BJE1 867 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 IFIT1BQ5T764 474 aaKnown RBP15.95■□□□□ 0.14
PHTF1-204ENST00000369604 ESR2Q92731 530 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 MIEF2Q96C03 454 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 HAUS2Q9NVX0 235 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 RIPOR2Q9Y4F9 1068 aa15.95■□□□□ 0.14
PHTF1-204ENST00000369604 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
PHTF1-204ENST00000369604 CYFIP2Q96F07 1278 aa15.94■□□□□ 0.14
PHTF1-204ENST00000369604 PLAAQ9Y263 795 aa15.94■□□□□ 0.14
PHTF1-204ENST00000369604 GBP2P32456 591 aaPredicted RBP15.94■□□□□ 0.14
PHTF1-204ENST00000369604 IL17AQ16552 155 aa15.94■□□□□ 0.14
PHTF1-204ENST00000369604 TDRD12Q587J7 1177 aaKnown RBP15.94■□□□□ 0.14
PHTF1-204ENST00000369604 ARFGAP2Q8N6H7 521 aa15.94■□□□□ 0.14
PHTF1-204ENST00000369604 MYH10P35580 1976 aa15.94■□□□□ 0.14
PHTF1-204ENST00000369604 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
PHTF1-204ENST00000369604 PP2D1A8MPX8 630 aa15.93■□□□□ 0.14
PHTF1-204ENST00000369604 PRPF3O43395 683 aaKnown RBP15.93■□□□□ 0.14
PHTF1-204ENST00000369604 RASSF9O75901 435 aa15.93■□□□□ 0.14
PHTF1-204ENST00000369604 PRLRP16471 622 aa15.93■□□□□ 0.14
PHTF1-204ENST00000369604 NAA25Q14CX7 972 aa15.93■□□□□ 0.14
PHTF1-204ENST00000369604 CYB5D1Q6P9G0 228 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms