RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TINF2Q9BSI4 451 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 MTA3Q9BTC8 594 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 DNAJC25-GNG10A0A024R161 153 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 PARP1P09874 1014 aaKnown RBP11.52□□□□□ -0.57
CD48-202ENST00000368046 ALAS1P13196 640 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 CNGA1P29973 690 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
CD48-202ENST00000368046 RNF20Q5VTR2 975 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 TMTC2Q8N394 836 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.57
CD48-202ENST00000368046 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 UBA5Q9GZZ9 404 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 OGDHLQ9ULD0 1010 aa11.52□□□□□ -0.57
CD48-202ENST00000368046 PLXNB2O15031 1838 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 MSCO60682 206 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 MCM5P33992 734 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 WTAPQ15007 396 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 MAMDC4Q6UXC1 1216 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
CD48-202ENST00000368046 MB21D2Q8IYB1 491 aaPredicted RBP11.51□□□□□ -0.57
CD48-202ENST00000368046 ADGRF4Q8IZF3 695 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 HOMER2Q9NSB8 354 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 RNF146Q9NTX7 359 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 CCPG1Q9ULG6 757 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
CD48-202ENST00000368046 CYBAP13498 195 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 ANTXR2P58335 489 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 TROAPQ12815 778 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 TMEM67Q5HYA8 995 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 PRAMEF19Q5SWL8 479 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 STAG2Q8N3U4 1231 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 TRPV1Q8NER1 839 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 PAWRQ96IZ0 340 aaKnown RBP11.5□□□□□ -0.57
CD48-202ENST00000368046 TMEM87BQ96K49 555 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 VAT1LQ9HCJ6 419 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 DDX20Q9UHI6 824 aaKnown RBP11.5□□□□□ -0.57
CD48-202ENST00000368046 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 MYH4Q9Y623 1939 aa11.5□□□□□ -0.57
CD48-202ENST00000368046 PALM3A6NDB9 673 aaPredicted RBP11.49□□□□□ -0.57
CD48-202ENST00000368046 KLRF2D3W0D1 207 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 SEPT4O43236 478 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 PRC1O43663 620 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
CD48-202ENST00000368046 CNTN2Q02246 1040 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 NECAB2Q7Z6G3 386 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 FAM133AQ8N9E0 248 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 RGS22Q8NE09 1264 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 NEK1Q96PY6 1258 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 MAP3K14Q99558 947 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 MAF1Q9H063 256 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 CPVLQ9H3G5 476 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 JMJD4Q9H9V9 463 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 A1CFQ9NQ94 594 aaKnown RBP11.49□□□□□ -0.57
CD48-202ENST00000368046 CYP39A1Q9NYL5 469 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 PFASO15067 1338 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 WDR19Q8NEZ3 1342 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
CD48-202ENST00000368046 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
CD48-202ENST00000368046 DHX16O60231 1041 aaKnown RBP11.48□□□□□ -0.57
CD48-202ENST00000368046 REC8O95072 547 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 SNAI1O95863 264 aaPredicted RBP11.48□□□□□ -0.57
CD48-202ENST00000368046 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
CD48-202ENST00000368046 LIFRP42702 1097 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
CD48-202ENST00000368046 KRT32Q14532 448 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 NSMFQ6X4W1 530 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 HTATIP2Q9BUP3 242 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 ABHD16BQ9H3Z7 469 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 LY9Q9HBG7 655 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 CNPY2Q9Y2B0 182 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 BRCA2P51587 3418 aa11.48□□□□□ -0.57
CD48-202ENST00000368046 CCDC69A6NI79 296 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 ASB14A6NK59 587 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 ZNF865P0CJ78 1059 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 TAL1P17542 331 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 BAATQ14032 418 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 GRM4Q14833 912 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 CDC37Q16543 378 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 FBXO11Q86XK2 927 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 DPF3Q92784 378 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 KCNB2Q92953 911 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 FGD4Q96M96 766 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms