RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 RNF207Q6ZRF8 634 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 RNF180Q86T96 592 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 MB21D2Q8IYB1 491 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-216ENST00000366744 DIS3LQ8TF46 1054 aaKnown RBP10.85□□□□□ -0.67
MRPL55-216ENST00000366744 TMEM87BQ96K49 555 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 MTA3Q9BTC8 594 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 ABHD16BQ9H3Z7 469 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 SPC25Q9HBM1 224 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 XPNPEP3Q9NQH7 507 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 CYP39A1Q9NYL5 469 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 CALM1P0DP23 149 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 CALM2P0DP24 149 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 CALM3P0DP25 149 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 CALML3P27482 149 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 GRM4Q14833 912 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 MUM1L1Q5H9M0 696 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 STOX1Q6ZVD7 989 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 ARMCX2Q7L311 632 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 CHST3Q7LGC8 479 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 FBXO11Q86XK2 927 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 MCF2L2Q86YR7 1114 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 ADGRF4Q8IZF3 695 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 NUP133Q8WUM0 1156 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 UBA5Q9GZZ9 404 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-216ENST00000366744 SEC63Q9UGP8 760 aaKnown RBP10.84□□□□□ -0.67
MRPL55-216ENST00000366744 FAM184BQ9ULE4 1060 aa10.84□□□□□ -0.67
MRPL55-216ENST00000366744 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 NFIBO00712 420 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 HMGB1P09429 215 aaKnown RBP10.83□□□□□ -0.68
MRPL55-216ENST00000366744 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
MRPL55-216ENST00000366744 QRICH1Q2TAL8 776 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 PRAMEF19Q5SWL8 479 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 ANO1Q5XXA6 986 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 LHX8Q68G74 356 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 NOL8Q76FK4 1167 aaKnown RBP10.83□□□□□ -0.68
MRPL55-216ENST00000366744 UBE2Q1Q7Z7E8 422 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 CCDC144CPQ8IYA2 1237 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 ZNF654Q8IZM8 581 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 FAM133AQ8N9E0 248 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 TRPV1Q8NER1 839 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 AMNQ9BXJ7 453 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 MAF1Q9H063 256 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 VAT1LQ9HCJ6 419 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 MRPL11Q9Y3B7 192 aaKnown RBP10.83□□□□□ -0.68
MRPL55-216ENST00000366744 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 DNAH12Q6ZR08 3092 aa10.83□□□□□ -0.68
MRPL55-216ENST00000366744 MYH7BA7E2Y1 1941 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 SH2B2O14492 632 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-216ENST00000366744 ZBTB5O15062 677 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 EIF5BO60841 1220 aaKnown RBP10.82□□□□□ -0.68
MRPL55-216ENST00000366744 GNAQP50148 359 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-216ENST00000366744 CNTN2Q02246 1040 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 PDE4DQ08499 809 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 ACVR2BQ13705 512 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-216ENST00000366744 NECTIN1Q15223 517 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 GJC2Q5T442 439 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-216ENST00000366744 SLC30A10Q6XR72 485 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 C7orf61Q8IZ16 206 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 NEK1Q96PY6 1258 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 SENP6Q9GZR1 1112 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-216ENST00000366744 CPVLQ9H3G5 476 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 LY9Q9HBG7 655 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 VTA1Q9NP79 307 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 PRKAG2Q9UGJ0 569 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 TAF6LQ9Y6J9 622 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 TRIOBPQ9H2D6 2365 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 SYNRGQ9UMZ2 1314 aa10.82□□□□□ -0.68
MRPL55-216ENST00000366744 IGHA2P01877 340 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 TAL1P17542 331 aaPredicted RBP10.81□□□□□ -0.68
MRPL55-216ENST00000366744 LIFRP42702 1097 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 ANTXR2P58335 489 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 RPS6P62753 249 aaKnown RBP10.81□□□□□ -0.68
MRPL55-216ENST00000366744 CCDC144BQ3MJ40 725 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 MICU3Q86XE3 530 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 DNERQ8NFT8 737 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 RRP36Q96EU6 259 aaKnown RBP10.81□□□□□ -0.68
MRPL55-216ENST00000366744 MAP3K14Q99558 947 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 LZTS2Q9BRK4 669 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 AP5M1Q9H0R1 490 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 JMJD4Q9H9V9 463 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 NAP1L2Q9ULW6 460 aaPredicted RBP10.81□□□□□ -0.68
MRPL55-216ENST00000366744 LTBP2Q14767 1821 aa10.81□□□□□ -0.68
MRPL55-216ENST00000366744 PALM3A6NDB9 673 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-216ENST00000366744 H0YGN5 161 aa10.8□□□□□ -0.68
MRPL55-216ENST00000366744 DUSP11O75319 330 aaKnown RBP10.8□□□□□ -0.68
MRPL55-216ENST00000366744 SNAI1O95863 264 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-216ENST00000366744 C6orf222P0C671 652 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-216ENST00000366744 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-216ENST00000366744 TROAPQ12815 778 aa10.8□□□□□ -0.68
MRPL55-216ENST00000366744 LRRC41Q15345 812 aa10.8□□□□□ -0.68
MRPL55-216ENST00000366744 BRDTQ58F21 947 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-216ENST00000366744 EEPD1Q7L9B9 569 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms