RNA–Protein interactions for RNA: ENST00000366732.5

MRPL55-206, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-206ENST00000366732 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
MRPL55-206ENST00000366732 FBXL16Q8N461 479 aa18.34■□□□□ 0.53
MRPL55-206ENST00000366732 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
MRPL55-206ENST00000366732 MAF1Q9H063 256 aa18.34■□□□□ 0.53
MRPL55-206ENST00000366732 SEC63Q9UGP8 760 aaKnown RBP18.34■□□□□ 0.53
MRPL55-206ENST00000366732 MRPL11Q9Y3B7 192 aaKnown RBP18.34■□□□□ 0.53
MRPL55-206ENST00000366732 PLXNB2O15031 1838 aa18.34■□□□□ 0.53
MRPL55-206ENST00000366732 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 CCDC196A0A1B0GTZ2 297 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 PTPDC1A2A3K4 754 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 RCAN1P53805 252 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
MRPL55-206ENST00000366732 PPP2R5BQ15173 497 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 HOMER1Q86YM7 354 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 BRF1Q92994 677 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
MRPL55-206ENST00000366732 UNC93B1Q9H1C4 597 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
MRPL55-206ENST00000366732 FLRT1Q9NZU1 646 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.52
MRPL55-206ENST00000366732 DNAJC25-GNG10A0A024R161 153 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 PNMA6FA0A0J9YX94 578 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 GJB1P08034 283 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 RXRAP19793 462 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 CYP2C19P33261 490 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 TRIM32Q13049 653 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 ZNF467Q7Z7K2 595 aaPredicted RBP18.32■□□□□ 0.52
MRPL55-206ENST00000366732 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 MTMR8Q96EF0 704 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 SPZ1Q9BXG8 430 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
MRPL55-206ENST00000366732 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 GOLGA8BA8MQT2 603 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 CNGA1P29973 690 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
MRPL55-206ENST00000366732 RTN1Q16799 776 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 PIGSQ96S52 555 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 MPHOSPH6Q99547 160 aaKnown RBP18.31■□□□□ 0.52
MRPL55-206ENST00000366732 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
MRPL55-206ENST00000366732 UPF2Q9HAU5 1272 aaKnown RBP18.31■□□□□ 0.52
MRPL55-206ENST00000366732 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
MRPL55-206ENST00000366732 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
MRPL55-206ENST00000366732 SYNGAP1Q96PV0 1343 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 ASB14A6NK59 587 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 B4DLN1 442 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 NFIBO00712 420 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 SEC24BO95487 1268 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 TFRCP02786 760 aaKnown RBP18.3■□□□□ 0.52
MRPL55-206ENST00000366732 RGS19P49795 217 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
MRPL55-206ENST00000366732 APOBRQ0VD83 1088 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-206ENST00000366732 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
MRPL55-206ENST00000366732 UPF3BQ9BZI7 483 aaKnown RBP18.3■□□□□ 0.52
MRPL55-206ENST00000366732 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-206ENST00000366732 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 CYTH3O43739 400 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 MSCO60682 206 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 SGPL1O95470 568 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 CALML3P27482 149 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 GJA8P48165 433 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 CNTN2Q02246 1040 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
MRPL55-206ENST00000366732 MAMDC4Q6UXC1 1216 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
MRPL55-206ENST00000366732 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
MRPL55-206ENST00000366732 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
MRPL55-206ENST00000366732 ZNFX1Q9P2E3 1918 aaKnown RBP18.29■□□□□ 0.52
MRPL55-206ENST00000366732 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
MRPL55-206ENST00000366732 TAL1P17542 331 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-206ENST00000366732 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
MRPL55-206ENST00000366732 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
MRPL55-206ENST00000366732 SAMD3Q8N6K7 520 aa18.28■□□□□ 0.52
MRPL55-206ENST00000366732 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
MRPL55-206ENST00000366732 LOC102724159A0A0B4J2E5 919 aa18.27■□□□□ 0.52
MRPL55-206ENST00000366732 IGHA2P01877 340 aa18.27■□□□□ 0.52
MRPL55-206ENST00000366732 EN2P19622 333 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-206ENST00000366732 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-206ENST00000366732 PWP2Q15269 919 aaKnown RBP18.27■□□□□ 0.52
MRPL55-206ENST00000366732 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.52
MRPL55-206ENST00000366732 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
MRPL55-206ENST00000366732 SEPT4O43236 478 aa18.26■□□□□ 0.51
MRPL55-206ENST00000366732 CFBP00751 764 aa18.26■□□□□ 0.51
MRPL55-206ENST00000366732 CYBAP13498 195 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms