RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
YBX3-203ENST00000366286 KATNBL1Q9H079 304 aa12.12□□□□□ -0.47
YBX3-203ENST00000366286 ZMYND8Q9ULU4 1186 aaPredicted RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
YBX3-203ENST00000366286 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 SYN1P17600 705 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
YBX3-203ENST00000366286 ANTXR2P58335 489 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 USH1GQ495M9 461 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 CHST3Q7LGC8 479 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 MB21D2Q8IYB1 491 aaPredicted RBP12.11□□□□□ -0.47
YBX3-203ENST00000366286 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
YBX3-203ENST00000366286 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 FAM184BQ9ULE4 1060 aa12.11□□□□□ -0.47
YBX3-203ENST00000366286 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 ASB14A6NK59 587 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 IFIT3O14879 490 aaKnown RBP12.1□□□□□ -0.47
YBX3-203ENST00000366286 ADAMTS4O75173 837 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 ALDH5A1P51649 535 aaPredicted RBP12.1□□□□□ -0.47
YBX3-203ENST00000366286 RTP1P59025 263 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
YBX3-203ENST00000366286 WTAPQ15007 396 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 RNF180Q86T96 592 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 ADGRF4Q8IZF3 695 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 PRO3102Q9H379 93 aa12.1□□□□□ -0.47
YBX3-203ENST00000366286 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
YBX3-203ENST00000366286 ERICH2A1L162 156 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 MYADML2A6NDP7 307 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 SLC27A2O14975 620 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
YBX3-203ENST00000366286 DUSP11O75319 330 aaKnown RBP12.09□□□□□ -0.47
YBX3-203ENST00000366286 CDC45O75419 566 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 NEFLP07196 543 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 CALML3P27482 149 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 ADCYAP1R1P41586 468 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
YBX3-203ENST00000366286 QRICH1Q2TAL8 776 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 RNF207Q6ZRF8 634 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
YBX3-203ENST00000366286 FERMT2Q96AC1 680 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 JMJD4Q9H9V9 463 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 MAD2L2Q9UI95 211 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 ABCB11O95342 1321 aa12.09□□□□□ -0.47
YBX3-203ENST00000366286 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 SLC34A2O95436 690 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 GRM4Q14833 912 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 SNX17Q15036 470 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 NECTIN1Q15223 517 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 TMEM67Q5HYA8 995 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 MORC4Q8TE76 937 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
YBX3-203ENST00000366286 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
YBX3-203ENST00000366286 PRC1O43663 620 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 C6orf222P0C671 652 aaPredicted RBP12.07□□□□□ -0.48
YBX3-203ENST00000366286 PTGS1P23219 599 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 CST5P28325 142 aaPredicted RBP12.07□□□□□ -0.48
YBX3-203ENST00000366286 MAGEA10P43363 369 aaPredicted RBP12.07□□□□□ -0.48
YBX3-203ENST00000366286 TNFAIP2Q03169 654 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 SLC35G1Q2M3R5 365 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 CASC1Q6TDU7 716 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 FBXO11Q86XK2 927 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 IGDCC4Q8TDY8 1250 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 MTMR8Q96EF0 704 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 GDF15Q99988 308 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 LY9Q9HBG7 655 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 VAT1LQ9HCJ6 419 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 VTA1Q9NP79 307 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
YBX3-203ENST00000366286 PDGFCQ9NRA1 345 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
YBX3-203ENST00000366286 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
YBX3-203ENST00000366286 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
YBX3-203ENST00000366286 MOXD2PA6NHM9 499 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms