RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 NRBP1Q9UHY1 535 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 SKILP12757 684 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 SFPQP23246 707 aaKnown RBP eCLIP10.28□□□□□ -0.76
CALD1-202ENST00000361901 CDR1P51861 262 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 SMC1AQ14683 1233 aaKnown RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 FAM107BQ9H098 131 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 ARHGEF10LQ9HCE6 1279 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 PCDHA4Q9UN74 947 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 A0A1W2PQ27 194 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 A0A1W2PQ64 194 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 A0A1W2PQD8 194 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 CHMP2AO43633 222 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 EVCP57679 992 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 CIAPIN1Q6FI81 312 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 DYMQ7RTS9 669 aa10.27□□□□□ -0.76
CALD1-202ENST00000361901 DDTLA6NHG4 134 aaPredicted RBP10.27□□□□□ -0.77
CALD1-202ENST00000361901 PHACTR2O75167 634 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 FMR1NBQ8N0W7 255 aaPredicted RBP10.27□□□□□ -0.77
CALD1-202ENST00000361901 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
CALD1-202ENST00000361901 LZTS2Q9BRK4 669 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 IRAK4Q9NWZ3 460 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 LCMT1Q9UIC8 334 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 SAMM50Q9Y512 469 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 PP2D1A8MPX8 630 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 NEMFO60524 1076 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 C16orf86Q6ZW13 317 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 KANSL2Q9H9L4 492 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 MTMR4Q9NYA4 1195 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 SWAP70Q9UH65 585 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 ADAMTS7Q9UKP4 1686 aa10.27□□□□□ -0.77
CALD1-202ENST00000361901 COL1A1P02452 1464 aaPredicted RBP10.27□□□□□ -0.77
CALD1-202ENST00000361901 USP17L15C9J2P7 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L13C9JLJ4 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L11C9JVI0 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L18D6R9N7 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L22D6RA61 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L17D6RBQ6 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L19D6RCP7 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L20D6RJB6 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 RGL2O15211 777 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 PPP6R2O75170 966 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 SP4Q02446 784 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L24Q0WX57 530 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 EARS2Q5JPH6 523 aaKnown RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 USP17L6PQ6QN14 398 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 KRT25Q7Z3Z0 450 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 PPFIBP1Q86W92 1011 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CCDC17Q96LX7 622 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 ZBTB21Q9ULJ3 1066 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
CALD1-202ENST00000361901 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 GLI3P10071 1580 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 EIF3CLB5ME19 914 aaKnown RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 ACTN2P35609 894 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 NLRP12P59046 1061 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 GRM4Q14833 912 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 ZNF513Q8N8E2 541 aaPredicted RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 EIF3CQ99613 913 aaKnown RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 DHX36Q9H2U1 1008 aaKnown RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 LRWD1Q9UFC0 647 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 ERLIN2O94905 339 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CAVIN2O95810 425 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 HOXA13P31271 388 aaPredicted RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 RHBDL3P58872 404 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CALCRLQ16602 461 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 SHROOM1Q2M3G4 852 aaPredicted RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 KRT79Q5XKE5 535 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 NEK8Q86SG6 692 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 GPIHBP1Q8IV16 184 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 FMNL3Q8IVF7 1028 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 TMEM39BQ9GZU3 492 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 NFE2L3Q9Y4A8 694 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CRYBG1Q9Y4K1 1723 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CBFA2T2O43439 604 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CCT6AP40227 531 aaKnown RBP10.26□□□□□ -0.77
CALD1-202ENST00000361901 ZNF75DP51815 510 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 MYL5Q02045 173 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 FERMT2Q96AC1 680 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 TRIM47Q96LD4 638 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 SALL1Q9NSC2 1324 aa10.26□□□□□ -0.77
CALD1-202ENST00000361901 H7C1D1 291 aa10.25□□□□□ -0.77
CALD1-202ENST00000361901 DDX39AO00148 427 aaKnown RBP10.25□□□□□ -0.77
CALD1-202ENST00000361901 LIG3P49916 1009 aa10.25□□□□□ -0.77
CALD1-202ENST00000361901 CEP57Q86XR8 500 aa10.25□□□□□ -0.77
CALD1-202ENST00000361901 TBC1D7Q9P0N9 293 aa10.25□□□□□ -0.77
CALD1-202ENST00000361901 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
CALD1-202ENST00000361901 F5H6K3 240 aa10.25□□□□□ -0.77
CALD1-202ENST00000361901 PPP1R12AO14974 1030 aaPredicted RBP10.25□□□□□ -0.77
CALD1-202ENST00000361901 N4BP3O15049 544 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms