RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ZNF652Q9Y2D9 606 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 A0A087X0B3 334 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 B4E1Z4 1266 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 BMP15O95972 392 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 LSP1P33241 339 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 GPR162Q16538 588 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 LRRC24Q50LG9 513 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 CEP85LQ5SZL2 805 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 SUSD4Q5VX71 490 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 CCDC170Q8IYT3 715 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 N4BP2L2Q92802 583 aaPredicted RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 FERMT2Q96AC1 680 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 ZNHIT6Q9NWK9 470 aaKnown RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 ODF2LQ9ULJ1 636 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 BCORQ6W2J9 1755 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 C10orf71Q711Q0 1435 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 GOLGA6L7A0A1B0GV03 622 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 TRIM75PA6NK02 468 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 RASSF9O75901 435 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 DEXIO95424 95 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 GCFC2P16383 781 aaKnown RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 MEA1Q16626 185 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 RNF187Q5TA31 235 aaPredicted RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 EMC10Q5UCC4 262 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 GIGYF2Q6Y7W6 1299 aaKnown RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 ZNF473Q8WTR7 871 aaKnown RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 ACTR5Q9H9F9 607 aaPredicted RBP16.61■□□□□ 0.25
UBAP1-202ENST00000359544 SNX12Q9UMY4 172 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 MYH7P12883 1935 aa16.61■□□□□ 0.25
UBAP1-202ENST00000359544 CLEC4GQ6UXB4 293 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 MB21D1Q8N884 522 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
UBAP1-202ENST00000359544 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
UBAP1-202ENST00000359544 LRRC1Q9BTT6 524 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 PRLRP16471 622 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 CALRP27797 417 aaKnown RBP16.6■□□□□ 0.25
UBAP1-202ENST00000359544 CASP1P29466 404 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 CCDC13Q8IYE1 715 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 CEP120Q8N960 986 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 TRIM58Q8NG06 486 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 NELFBQ8WX92 580 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 RMND1Q9NWS8 449 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 STIM2Q9P246 746 aa16.6■□□□□ 0.25
UBAP1-202ENST00000359544 CCDC189A1A4V9 331 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 LGALS16A8MUM7 142 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 H7C1D1 291 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 ERCC3P19447 782 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 KCNA3P22001 575 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 GUCY1A2P33402 732 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
UBAP1-202ENST00000359544 KIF5AQ12840 1032 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 NR5A1Q13285 461 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 TSEN2Q8NCE0 465 aaKnown RBP16.59■□□□□ 0.25
UBAP1-202ENST00000359544 CABP5Q9NP86 173 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 PPP1R37O75864 691 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 SCP2P22307 547 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 ATP1A2P50993 1020 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 PTGISQ16647 500 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 SPATA4Q8NEY3 305 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 ZIM3Q96PE6 472 aa16.59■□□□□ 0.25
UBAP1-202ENST00000359544 DMGDHQ9UI17 866 aaKnown RBP16.59■□□□□ 0.25
UBAP1-202ENST00000359544 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.25
UBAP1-202ENST00000359544 PPP1R12AO14974 1030 aaPredicted RBP16.58■□□□□ 0.25
UBAP1-202ENST00000359544 TACC1O75410 805 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 ZAP70P43403 619 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 VAV2P52735 878 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 RTN1Q16799 776 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 ZNF34Q8IZ26 560 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 MAGEC3Q8TD91 643 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 TFR2Q9UP52 801 aa16.58■□□□□ 0.25
UBAP1-202ENST00000359544 NUP98P52948 1817 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 TCP1P17987 556 aaKnown RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 CRYMQ14894 314 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 SNCBQ16143 134 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 GLE1Q53GS7 698 aaKnown RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 C1orf131Q8NDD1 294 aaKnown RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 TBC1D22AQ8WUA7 517 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 RNPC3Q96LT9 517 aaKnown RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 NUP58Q9BVL2 599 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 LACRTQ9GZZ8 138 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 CWC25Q9NXE8 425 aaPredicted RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
UBAP1-202ENST00000359544 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
UBAP1-202ENST00000359544 PARP1P09874 1014 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms