RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MAEAQ7L5Y9 396 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 NSRP1Q9H0G5 558 aaKnown RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 ARPP21Q9UBL0 812 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 CDHR2Q9BYE9 1310 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 FAM196BA6NMK8 535 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 DPP8Q6V1X1 898 aaPredicted RBP15.58■□□□□ 0.09
SREBF1-202ENST00000355815 ADGRA1Q86SQ6 560 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 CLEC10AQ8IUN9 316 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 ZNF34Q8IZ26 560 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 REXO1Q8N1G1 1221 aaKnown RBP15.58■□□□□ 0.09
SREBF1-202ENST00000355815 EFCC1Q9HA90 598 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 ZBTB21Q9ULJ3 1066 aa15.58■□□□□ 0.09
SREBF1-202ENST00000355815 TYW1BQ6NUM6 668 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 FAM114A1Q8IWE2 563 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 MGARPQ8TDB4 240 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 FAM212AQ96EL1 285 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 PYM1Q9BRP8 204 aaKnown RBP15.58■□□□□ 0.08
SREBF1-202ENST00000355815 ABCB6Q9NP58 842 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 KRT71Q3SY84 523 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
SREBF1-202ENST00000355815 SRBD1Q8N5C6 995 aaKnown RBP15.58■□□□□ 0.08
SREBF1-202ENST00000355815 VEZTQ9HBM0 779 aa15.58■□□□□ 0.08
SREBF1-202ENST00000355815 MORC2Q9Y6X9 1032 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-202ENST00000355815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 B4DLN1 442 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 GJC1P36383 396 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 LACTBP83111 547 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 CYP27A1Q02318 531 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 SRGAP1Q7Z6B7 1085 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 SGMS1Q86VZ5 419 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 TMTC1Q8IUR5 882 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 EXOC4Q96A65 974 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 SELENOOQ9BVL4 669 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 ODF2LQ9ULJ1 636 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 C3orf67Q6ZVT6 689 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 FAM71BQ8TC56 605 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 PIGSQ96S52 555 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 BSDC1Q9NW68 430 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 EVX2Q03828 476 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 HERC4Q5GLZ8 1057 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 DCAF17Q5H9S7 520 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 ATP8A2Q9NTI2 1148 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 TMOD2Q9NZR1 351 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 EIF4E1BA6NMX2 242 aaKnown RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 PPP1R12BO60237 982 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-202ENST00000355815 HPS3Q969F9 1004 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 USP40Q9NVE5 1235 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 CDC23Q9UJX2 597 aa15.57■□□□□ 0.08
SREBF1-202ENST00000355815 MAGEA1P43355 309 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 RAPGEF1Q13905 1077 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 PPP2R5BQ15173 497 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 CALCRLQ16602 461 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 TXNRD3Q86VQ6 643 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 C2CD5Q86YS7 1000 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 COPB1P53618 953 aaKnown RBP15.56■□□□□ 0.08
SREBF1-202ENST00000355815 SNAP25P60880 206 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 FOXP4Q8IVH2 680 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-202ENST00000355815 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-202ENST00000355815 NKX2-3Q8TAU0 364 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 ENOX1Q8TC92 643 aaKnown RBP15.56■□□□□ 0.08
SREBF1-202ENST00000355815 TCP11Q8WWU5 503 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 CAMTA2O94983 1202 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 TMEM132AQ24JP5 1023 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 TMTC3Q6ZXV5 915 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 KCTD1Q719H9 257 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 N4BP2L2Q92802 583 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-202ENST00000355815 WDR24Q96S15 920 aa15.56■□□□□ 0.08
SREBF1-202ENST00000355815 PRPF3O43395 683 aaKnown RBP15.55■□□□□ 0.08
SREBF1-202ENST00000355815 CEP104O60308 925 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 CASP8Q14790 479 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 FBXO2Q9UK22 296 aaPredicted RBP15.55■□□□□ 0.08
SREBF1-202ENST00000355815 CCDC151A5D8V7 595 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 STX10O60499 249 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 TNNC1P63316 161 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 NCAPH2Q6IBW4 605 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 RRAGAQ7L523 313 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 HOOK3Q86VS8 718 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 PLA2G12BQ9BX93 195 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.55■□□□□ 0.08
SREBF1-202ENST00000355815 A0A087WUV0 522 aaPredicted RBP15.55■□□□□ 0.08
SREBF1-202ENST00000355815 SLC1A4P43007 532 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 SPICE1Q8N0Z3 855 aa15.55■□□□□ 0.08
SREBF1-202ENST00000355815 OR8K1Q8NGG5 319 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 TBCKQ8TEA7 893 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 GSDMAQ96QA5 445 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 CXCR5P32302 372 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 ACTN3Q08043 901 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 C3P01024 1663 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 RFX7Q2KHR2 1363 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 GTPBP6O43824 516 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 PLCG2P16885 1265 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 TOB1P50616 345 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 SP4Q02446 784 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 NFIXQ14938 502 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 CC2D1AQ6P1N0 951 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 EFCAB13Q8IY85 973 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms