RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 DRC1Q96MC2 740 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 SLC39A2Q9NP94 309 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 PCDHA1Q9Y5I3 950 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 SPDYE3A6NKU9 549 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 ECE2O60344 883 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 TRIM21P19474 475 aaKnown RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 LRRC41Q15345 812 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 CALCRLQ16602 461 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 SLC35G1Q2M3R5 365 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 SLFN13Q68D06 897 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 AKR1B15C9JRZ8 316 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-201ENST00000351288 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.548e-7■■□□□ 14.5
SMPD4-201ENST00000351288 ARHGAP6O43182 974 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 GH2P01242 217 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 ADRA2BP18089 450 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 TM4SF1P30408 202 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PMS1P54277 932 aaKnown RBP11.66□□□□□ -0.54
SMPD4-201ENST00000351288 GYS2P54840 703 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-201ENST00000351288 DGKHQ86XP1 1220 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 RAB34Q9BZG1 259 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PDGFDQ9GZP0 370 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-201ENST00000351288 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 OGFRQ9NZT2 677 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PCDHA4Q9UN74 947 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 ANKRD36CQ5JPF3 1778 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 POTEMA6NI47 508 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 CYTH3O43739 400 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 NR1I3Q14994 352 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-201ENST00000351288 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 NELFBQ8WX92 580 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 FERMT2Q96AC1 680 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 SLF1Q9BQI6 1058 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PSMA7O14818 248 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 PRR16Q569H4 304 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
SMPD4-201ENST00000351288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.544e-6■■□□□ 13.5
SMPD4-201ENST00000351288 PRCPP42785 496 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 CHMP4BP1P59074 171 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 KRT31Q15323 416 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 ZNF772Q68DY9 489 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 NCAPH2Q6IBW4 605 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 NEK8Q86SG6 692 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 CUL5Q93034 780 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 SRRTQ9BXP5 876 aaKnown RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.541e-6■■■■■ 118.5
SMPD4-201ENST00000351288 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 HDAC9Q9UKV0 1011 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 POLRMTO00411 1230 aaKnown RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 ZSCAN12O43309 604 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 MYO1BO43795 1136 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 KIF4BQ2VIQ3 1234 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 CCDC40Q4G0X9 1142 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 SLC27A3Q5K4L6 730 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 SPATA1Q5VX52 437 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 CHP1Q99653 195 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 MEIS1O00470 390 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 KLK7P49862 253 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 DMTNQ08495 405 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 ABCB5Q2M3G0 1257 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 PRAMEF18Q5VWM3 479 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
SMPD4-201ENST00000351288 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 ZNHIT6Q9NWK9 470 aaKnown RBP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMPD4-201ENST00000351288 ORC4O43929 436 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 TDP2O95551 362 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 TTLL1O95922 423 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 GYPCP04921 128 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 KIAA1328Q86T90 577 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 CSGALNACT2Q8N6G5 542 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 LRRC15Q8TF66 581 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 L2HGDHQ9H9P8 463 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 ENC1O14682 589 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 OR52Z1P0C646 297 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 PAK1Q13153 545 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 APTXQ7Z2E3 356 aaKnown RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 SP8Q8IXZ3 490 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 MYH8P13535 1937 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms