RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 CYLC1P35663 651 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-201ENST00000349038 SARSP49591 514 aaKnown RBP16.84■□□□□ 0.29
PTBP1-201ENST00000349038 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
PTBP1-201ENST00000349038 TUBB4BP68371 445 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 ZCWPW1Q9H0M4 648 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 MYH8P13535 1937 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 TRIM75PA6NK02 468 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 GLI1P08151 1106 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 KRT83P78385 493 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.29
PTBP1-201ENST00000349038 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 DNAAF5Q86Y56 855 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.29
PTBP1-201ENST00000349038 EPN3Q9H201 632 aa16.83■□□□□ 0.29
PTBP1-201ENST00000349038 PARP1P09874 1014 aaKnown RBP16.83■□□□□ 0.28
PTBP1-201ENST00000349038 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 TCP11X2Q5H9J9 407 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 FMNL3Q8IVF7 1028 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 MDM1Q8TC05 714 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 NSMCE1Q8WV22 266 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 RSRC1Q96IZ7 334 aaKnown RBP16.83■□□□□ 0.28
PTBP1-201ENST00000349038 GOLPH3Q9H4A6 298 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 FAM217BQ9NTX9 383 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-201ENST00000349038 STIM2Q9P246 746 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 PPP1R3GB7ZBB8 358 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 TACC1O75410 805 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 CABP4P57796 275 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 KCNB1Q14721 858 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 PTGISQ16647 500 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 PREPLQ4J6C6 727 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-201ENST00000349038 HELBQ8NG08 1087 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-201ENST00000349038 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 TANGO6Q9C0B7 1094 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 VCPKMTQ9H867 229 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
PTBP1-201ENST00000349038 DCCP43146 1447 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 AMOTL1Q8IY63 956 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 FUKQ8N0W3 1084 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 CPSF2Q9P2I0 782 aaKnown RBP16.82■□□□□ 0.28
PTBP1-201ENST00000349038 PLAAQ9Y263 795 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 ZNF233A6NK53 670 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 RASSF7Q02833 373 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 AENQ8WTP8 325 aaKnown RBP16.82■□□□□ 0.28
PTBP1-201ENST00000349038 ATRNO75882 1429 aa16.82■□□□□ 0.28
PTBP1-201ENST00000349038 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
PTBP1-201ENST00000349038 EPHB4P54760 987 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 RTN1Q16799 776 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 SH3GL2Q99962 352 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 IRAK4Q9NWZ3 460 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 STK36Q9NRP7 1315 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 SNAP23O00161 211 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 PRCPP42785 496 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 IFNAR2P48551 515 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 KANK3Q6NY19 840 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 SELENOSQ9BQE4 189 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 MYO1AQ9UBC5 1043 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 PSMD14O00487 310 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 FSBPO95073 299 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 THEMIS2Q5TEJ8 643 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 IGDCC4Q8TDY8 1250 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 HPS3Q969F9 1004 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 TMEM87BQ96K49 555 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTBP1-201ENST00000349038 NLRC4Q9NPP4 1024 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 ZSWIM5Q9P217 1185 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 G3BP2Q9UN86 482 aaKnown RBP16.81■□□□□ 0.28
PTBP1-201ENST00000349038 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
PTBP1-201ENST00000349038 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
PTBP1-201ENST00000349038 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
PTBP1-201ENST00000349038 IRF6O14896 467 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 GNPTABQ3T906 1256 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 FAM228AQ86W67 206 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 TRIML1Q8N9V2 468 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 OSBPL7Q9BZF2 842 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 NAPBQ9H115 298 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 MYH7P12883 1935 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
PTBP1-201ENST00000349038 CALRP27797 417 aaKnown RBP16.8■□□□□ 0.28
PTBP1-201ENST00000349038 ADD2P35612 726 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 MDH1P40925 334 aaKnown RBP16.8■□□□□ 0.28
PTBP1-201ENST00000349038 SMTNP53814 917 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 AP1ARQ63HQ0 302 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 WDR59Q6PJI9 974 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 ADAT2Q7Z6V5 191 aaKnown RBP16.8■□□□□ 0.28
PTBP1-201ENST00000349038 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 OSBPL9Q96SU4 736 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
PTBP1-201ENST00000349038 ERICH2A1L162 156 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 PP2D1A8MPX8 630 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 MMP1P03956 469 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 MYH10P35580 1976 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 COL18A1P39060 1754 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 PTGDRQ13258 359 aa16.79■□□□□ 0.28
PTBP1-201ENST00000349038 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms