RNA–Protein interactions for RNA: ENST00000346997.6

FGFR2-202, Transcript of fibroblast growth factor receptor 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FGFR2, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-202ENST00000346997 SCP2P22307 547 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 CALML3P27482 149 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 MARSP56192 900 aaKnown RBP11.79□□□□□ -0.52
FGFR2-202ENST00000346997 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
FGFR2-202ENST00000346997 ATL2Q8NHH9 583 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 DDX4Q9NQI0 724 aaKnown RBP11.79□□□□□ -0.52
FGFR2-202ENST00000346997 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 TUBE1Q9UJT0 475 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 PCDHA5Q9Y5H7 936 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 BMP15O95972 392 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 MCM7P33993 719 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 PTGDRQ13258 359 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 USP17L2Q6R6M4 530 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 BLIDQ8IZY5 108 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 TEKT1Q969V4 418 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 SERTAD1Q9UHV2 236 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
FGFR2-202ENST00000346997 VWA3AA6NCI4 1184 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
FGFR2-202ENST00000346997 EIF6P56537 245 aaKnown RBP11.78□□□□□ -0.52
FGFR2-202ENST00000346997 TPM4P67936 248 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 POSTNQ15063 836 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 SLC35G1Q2M3R5 365 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 EPSTI1Q96J88 318 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
FGFR2-202ENST00000346997 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
FGFR2-202ENST00000346997 WWC2Q6AWC2 1192 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 PODNQ7Z5L7 613 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 FOXP4Q8IVH2 680 aaPredicted RBP11.78□□□□□ -0.52
FGFR2-202ENST00000346997 GRAMD1CQ8IYS0 662 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 FERMT2Q96AC1 680 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 DHX58Q96C10 678 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 MRFAP1L1Q96HT8 127 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 PCDHA4Q9UN74 947 aa11.78□□□□□ -0.52
FGFR2-202ENST00000346997 IRF6O14896 467 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.53
FGFR2-202ENST00000346997 CDC42EP5Q6NZY7 148 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 FMNL3Q8IVF7 1028 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.53
FGFR2-202ENST00000346997 OTUD6BQ8N6M0 293 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 CEP120Q8N960 986 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 PIK3R5Q8WYR1 880 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
FGFR2-202ENST00000346997 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 FOCADQ5VW36 1801 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 ADAMTSL1Q8N6G6 1762 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 SMTNL1A8MU46 457 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 SMC2O95347 1197 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
FGFR2-202ENST00000346997 CDC25BP30305 580 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 TRAPPC10P48553 1259 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 ATP2C1P98194 919 aaPredicted RBP11.77□□□□□ -0.53
FGFR2-202ENST00000346997 LRMPQ12912 555 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 LRRC47Q8N1G4 583 aaKnown RBP11.77□□□□□ -0.53
FGFR2-202ENST00000346997 LZTS2Q9BRK4 669 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 PYCARDQ9ULZ3 195 aa11.77□□□□□ -0.53
FGFR2-202ENST00000346997 AKR1B1P15121 316 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 CRKP46108 304 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 NFIAQ12857 509 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 NOLC1Q14978 699 aaKnown RBP eCLIP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 FILIP1Q7Z7B0 1213 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 C7orf43Q8WVR3 580 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 OSBPL5Q9H0X9 879 aaPredicted RBP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 BARHL2Q9NY43 387 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 SEC63Q9UGP8 760 aaKnown RBP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 A0A087X0B3 334 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 STXBP3O00186 592 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 ECE2O60344 883 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 CACNB3P54284 484 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 NAPAP54920 295 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 GABPAQ06546 454 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 ICE2Q659A1 982 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 RRP36Q96EU6 259 aaKnown RBP11.76□□□□□ -0.53
FGFR2-202ENST00000346997 CCDC34Q96HJ3 373 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 TMEM51Q9NW97 253 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 PCDHAC2Q9Y5I4 1007 aa11.76□□□□□ -0.53
FGFR2-202ENST00000346997 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms