RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CTDP1Q9Y5B0 961 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-201ENST00000346213 MCM3APO60318 1980 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 MYADML2A6NDP7 307 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 NECAB2Q7Z6G3 386 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 MYL10Q9BUA6 226 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
RAB5C-201ENST00000346213 CEP290O15078 2479 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.79■□□□□ 0.6
RAB5C-201ENST00000346213 OPLAHO14841 1288 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 CYTH3O43739 400 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 CDC37Q16543 378 aaPredicted RBP18.79■□□□□ 0.6
RAB5C-201ENST00000346213 NSMFQ6X4W1 530 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 DPF3Q92784 378 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 LRRC2Q9BYS8 371 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 FBXO40Q9UH90 709 aa18.79■□□□□ 0.6
RAB5C-201ENST00000346213 SYNGAP1Q96PV0 1343 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
RAB5C-201ENST00000346213 PGK1P00558 417 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 TROAPQ12815 778 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 BAATQ14032 418 aaPredicted RBP18.78■□□□□ 0.6
RAB5C-201ENST00000346213 QRICH1Q2TAL8 776 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 ADCK5Q3MIX3 580 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 USH1GQ495M9 461 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
RAB5C-201ENST00000346213 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
RAB5C-201ENST00000346213 NCOA7Q8NI08 942 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 SLC5A4Q9NY91 659 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 COL20A1Q9P218 1284 aa18.78■□□□□ 0.6
RAB5C-201ENST00000346213 PALM3A6NDB9 673 aaPredicted RBP18.77■□□□□ 0.6
RAB5C-201ENST00000346213 POTEB2H3BUK9 544 aa18.77■□□□□ 0.6
RAB5C-201ENST00000346213 LRRC41Q15345 812 aa18.77■□□□□ 0.6
RAB5C-201ENST00000346213 TKFCQ3LXA3 575 aa18.77■□□□□ 0.6
RAB5C-201ENST00000346213 ZHX1Q9UKY1 873 aaPredicted RBP18.77■□□□□ 0.6
RAB5C-201ENST00000346213 WDR19Q8NEZ3 1342 aa18.77■□□□□ 0.59
RAB5C-201ENST00000346213 CTAGE5O15320 804 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 ADAMTS4O75173 837 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 NT5C2P49902 561 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 GRM4Q14833 912 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 RAB11FIP4Q86YS3 637 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 MTMR8Q96EF0 704 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 TCEANC2Q96MN5 208 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 PDGFCQ9NRA1 345 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 SZT2Q5T011 3432 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 SH2B2O14492 632 aaPredicted RBP18.76■□□□□ 0.59
RAB5C-201ENST00000346213 PRC1O43663 620 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 PARP1P09874 1014 aaKnown RBP18.76■□□□□ 0.59
RAB5C-201ENST00000346213 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
RAB5C-201ENST00000346213 ACVR2BQ13705 512 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 C7orf61Q8IZ16 206 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 PRO3102Q9H379 93 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 VAT1LQ9HCJ6 419 aa18.76■□□□□ 0.59
RAB5C-201ENST00000346213 SYNRGQ9UMZ2 1314 aa18.75■□□□□ 0.59
RAB5C-201ENST00000346213 TMEM67Q5HYA8 995 aa18.75■□□□□ 0.59
RAB5C-201ENST00000346213 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
RAB5C-201ENST00000346213 FBXO16Q8IX29 292 aaPredicted RBP18.75■□□□□ 0.59
RAB5C-201ENST00000346213 SENP6Q9GZR1 1112 aaPredicted RBP18.75■□□□□ 0.59
RAB5C-201ENST00000346213 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
RAB5C-201ENST00000346213 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
RAB5C-201ENST00000346213 COLQQ9Y215 455 aaPredicted RBP18.75■□□□□ 0.59
RAB5C-201ENST00000346213 KLRF2D3W0D1 207 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 DNM1LO00429 736 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 CPA1P15085 419 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 RXRAP19793 462 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 ATN1P54259 1190 aaPredicted RBP18.74■□□□□ 0.59
RAB5C-201ENST00000346213 RPS6P62753 249 aaKnown RBP18.74■□□□□ 0.59
RAB5C-201ENST00000346213 TRDNQ13061 729 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 WTAPQ15007 396 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 CCDC144BQ3MJ40 725 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 CCSAPQ6IQ19 270 aaPredicted RBP18.74■□□□□ 0.59
RAB5C-201ENST00000346213 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
RAB5C-201ENST00000346213 MORC4Q8TE76 937 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 HTATIP2Q9BUP3 242 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 XPNPEP3Q9NQH7 507 aa18.74■□□□□ 0.59
RAB5C-201ENST00000346213 MSCO60682 206 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 SYN1P17600 705 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 TAPT1Q6NXT6 567 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 FERMT2Q96AC1 680 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
RAB5C-201ENST00000346213 AKR1A1P14550 325 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 CALML3P27482 149 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 ALDH5A1P51649 535 aaPredicted RBP18.73■□□□□ 0.59
RAB5C-201ENST00000346213 PIGSQ96S52 555 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 CNPY2Q9Y2B0 182 aa18.73■□□□□ 0.59
RAB5C-201ENST00000346213 LAMA2P24043 3122 aaKnown RBP18.72■□□□□ 0.59
RAB5C-201ENST00000346213 PTPDC1A2A3K4 754 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 EVI5O60447 810 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 PLEKHA8P1O95397 391 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 CHRDL2Q6WN34 429 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 ZNF654Q8IZM8 581 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms